Literature DB >> 25799200

Correction: increase in resistance to extended-spectrum cephalosporins in salmonella isolated from retail chicken products in Japan.

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Abstract

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Year:  2015        PMID: 25799200      PMCID: PMC4370458          DOI: 10.1371/journal.pone.0121469

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


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There are a number of errors in Table 1. Please see the corrected Table 1 here.
Table 1

Number of tested chicken meat product samples, detected Salmonella isolates, resistant isolates, and resistance genes by year.

Isolation year19961997199819992000200120022003
No. of samples tested4121343435363339
No. of Salmonella-positive samples1696420161421
(%)(39.0%)(42.9%)(17.6%)(11.8%)(57.1%)(44.4%)(42.4%)(53.8%)
No. of Salmonella isolates16126520161421
No. of samples from which multiple Salmonella serotypes were isolated03010000
Salmonella serotypes isolated, (No. of isolate)Corvallis (1)*,Agona (1),Corvallis (3),Infantis (3),Corvallis (1),Haifa (2),Infantis (12),Cerro (1),
Haifa (1),Corvallis (1),Enteritidis (1),Untypeable with O7 (1),Infantis (18),Infantis (8),Yovokome (1),Haifa (1),
Infantis (12),Haifa (1),Infantis (1),Untypeable (1)Untypeable with O7 (1)Virchow (2),Untypeable with O7:y:- (1)Infantis (14),
Typhimurium (1),Infantis (5),Typhimurium (1)Untypeable with O18: Z4, Z23: —(3),Manhattan (2),
Untypeable with O4:i: (1)Typhimurium (2),Untypeable with O7 (1)Untypeable (3)
Untypeable with O4:b:- (1),
Untypeable with O8:z4,z24 (1)
Untested isolates with antimicrobial susceptibility--------
No. of tested isolates16126520161421
(No. of samples)(16)(9)(6)(4)(20)(16)(14)(21)
No. of resistant isolates00000000
(Percentage of tested isolates)(0.0%)(0.0%)(0.0%)(0.0%)(0.0%)(0.0%)(0.0%)(0.0%)
Detected resistance genes and serotypes--------
Isolation year2004200520062007200820092010Total
No. of samples tested3540404015788106779
No. of Salmonella-positive samples13221322764855355
(%)(37.1%)(55.0%)(32.5%)(55.0%)(48.4%)(54.5%)(51.9%)(45.6%)
No. of Salmonella isolates13251424815061378
No. of samples from which multiple Salmonella serotypes were isolated03124 2622
Salmonella serotypes isolated, (No. of isolate)Enteritidis (1),Enteritidis (1),Dunkwa (1),Corvallis (1),Enteritidis (1),Enteritidis (1),Agona (1),Infantis (180),
Infantis (9),Haifa (1),Infantis (8),Emek (1),Eppendorf (2),Infantis (14),Infantis (20),Schwarzengrund (70),
Manhattan (1),Corvallis (1),Manhattan (3),Enteritidis (1),Infantis (33),Manhattan (8),Manhattan (19),Manhattan (52),
Yovokome (1),Infantis (15),Schwarzengrund (2)Eppendorf (1),Jamaica (1),Schwarzengrund (21),Schwarzengrund (18),Untypeable (11),
Untypeable (1)Manhattan (2),Infantis (8),Manhattan (15),Untypeable with O4 (3),Virchow (1),Corvallis (8),
Montevideo (1),Manhattan (2),Schwarzengrund (21),Untypeable (3)Untypeable with O4 (1),Enteritidis (6),
Schwarzengrund (1),Schwarzengrund (7),Untypeable with O-untypeable:r:1,5 (3),Untypeable (1)Haifa (6),
Typhimurium (1),Typhimurium (1),Unrecorded (5)Typhimurium (6),
Untypeable (2)Untypeable with O4 (1),Unrecorded (5),
Untypeable with O7 (1)and other serotypes
Untested isolates with antimicrobial susceptibility----Unrecorded (5)--5
No. of tested isolates13251424765061373
(No. of samples)(13)(22)(13)(22)(71)(48)(55)(350)
No. of resistant isolates0201871735
(Percentage of tested isolates)(0.0%)(8.0%)(0.0%)(4.2%)(10.5%)(14.0%)(27.9%)(9.4%)
Detected resistance genes and serotypes-CMY-2 (Infantis, n = 1) § ,-CMY-2 (Infantis, n = 1)CMY-2 (Infantis, n = 5),CMY-2 (Infantis, n = 6),CMY-2 (Infantis, n = 11),CMY-2 (Infantis, n = 24),
TEM-20 (Infantis, n = 1)CMY-2 (O-untypeable:r:1,5, n = 1),TEM-52 (Manhattan, n = 1)CMY-2 (Manhattan, n = 1),CTX-M-15 & TEM-1 (Manhattan, n = 2),
TEM-52 (Infantis, n = 1),TEM-52 (Manhattan, n = 1),TEM-52 (Manhattan, n = 2),
CTX-M-2 (Manhattan, n = 1)CTX-M-2 (Infantis, n = 1)CMY-2 (Manhattan, n = 1),
CTX-M-15 & TEM-1 (Manhattan, n = 2),CMY-2 (O-untypeable:r:1,5, n = 1),
SHV-12 (Manhattan, n = 1)CTX-M-2 (Infantis, n = 1),
CTX-M-2 (Manhattan, n = 1),
SHV-12 (Manhattan, n = 1),
TEM-20 (Infantis, n = 1),
TEM-52 (Infantis, n = 1)

*Corvallis, Salmonella enterica subsp. enterica serovar Corvallis.

†One sample contained three serotypes, while other multi-Salmonella samples contained two serotypes.

‡Other serotypes, untypeable with O4 (5), untypeable with O7 (4), Eppendorf (3), untypeable with O18: Z4, Z23: —(3), untypeable with O-untypeable:r:1,5 (3), Virchow (3), Agona (2), Yovokome (2), Cerro (1), Dunkwa (1), Emek (1), Jamaica (1), Montevideo (1), untypeable with O4:b:- (1), untypeable with O4:i: (1), untypeable with O7:y:- (1), and untypeable with O8:z4,z24 (1).

§CMY-2, bla CMY-2.

*Corvallis, Salmonella enterica subsp. enterica serovar Corvallis. †One sample contained three serotypes, while other multi-Salmonella samples contained two serotypes. ‡Other serotypes, untypeable with O4 (5), untypeable with O7 (4), Eppendorf (3), untypeable with O18: Z4, Z23: —(3), untypeable with O-untypeable:r:1,5 (3), Virchow (3), Agona (2), Yovokome (2), Cerro (1), Dunkwa (1), Emek (1), Jamaica (1), Montevideo (1), untypeable with O4:b:- (1), untypeable with O4:i: (1), untypeable with O7:y:- (1), and untypeable with O8:z4,z24 (1). §CMY-2, bla CMY-2. In Table 2, cells including “Thi0073 study” in the Reference column should read “This study”. Please see the corrected Table 2 here.
Table 2

Sequences of primers used in this study.

bla genePurposePrimer NameNucleotide Sequence 5′–3′Reference
bla CMY Detectioncmy-FGACAGCCTCTTTCTCCACA[22]
cmy-RTGGAACGAAGGCTACGTA[22]
SequencingCMY2-outFGTTACAATGTGTGAGAAGCAGTCThis study
CMY2-outRATGGGATTTTCCTTGCTGTAThis study
CMY2-R0CAGTATTTCGTGACCGGAThis study
CMY2-F3CTGGATTACGGTTCCGCAThis study
bla CTX-M Detection and SequencingCTX-MU1ATGTGCAGYACCAGTAARGT[23]
CTX-MU2TGGGTRAARTARGTSACCAGA[23]
Sequencing bla CTX-M-1, forwardCTTCCAGAATAAGGAATCCC[26]
bla CTX-M-1, reverseCGTCTAAGGCGATAAACAAA[26]
CTX-outF2GCCAAGGGATAATACTAATAGAGGThis study
CTX-outRGCGGAATGATAGAAAGAGATGAGThis study
CTX-F2ACAATACTGCCATGAATAAGCTGThis study
CTX-R0CAATCAGCTTATTCATGGCAThis study
bla TEM DetectionMAb/FGGGGAGCTCATAAAATTCTTGAAGAC[24]
MAb/RGGGGGATCCTTACCAATGCTTAATCA[24]
SequencingMAb-F2AGCCCTCCCGTATCGTAGTTThis study
MAb-F1GAGGACCGAAGGAGCTAACCThis study
MAb-outRAACTACGATACGGGAGGGCTThis study
bla SHV DetectionSHV-FAGGATTGACTGCCTTTTTG[25]
SHV-RATTTGCTGATTTCGCTCG[25]
SequencingSHV-forwCAAAACGCCGGGTTATTC[27]
SHV-revTTAGCGTTGCCAGTGCT[27]
SHVseq-forwGGATTGACTGCCTTTTTGC[27]
SHVseq-revGCAAAAAGGCAGTCAATCC[27]
  1 in total

1.  Increase in resistance to extended-spectrum cephalosporins in Salmonella isolated from retail chicken products in Japan.

Authors:  Tamie Noda; Koichi Murakami; Yoshiki Etoh; Fuyuki Okamoto; Jun Yatsuyanagi; Nobuyuki Sera; Munenori Furuta; Daisuke Onozuka; Takahiro Oda; Tetsuo Asai; Shuji Fujimoto
Journal:  PLoS One       Date:  2015-02-02       Impact factor: 3.240

  1 in total
  1 in total

1.  Correction: Correction: Increase in Resistance to Extended-Spectrum Cephalosporins in Salmonella Isolated from Retail Chicken Products in Japan.

Authors: 
Journal:  PLoS One       Date:  2015-07-16       Impact factor: 3.240

  1 in total

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