Literature DB >> 25796611

Bacterial transfer RNAs.

Jennifer Shepherd1, Michael Ibba2.   

Abstract

Transfer RNA is an essential adapter molecule that is found across all three domains of life. The primary role of transfer RNA resides in its critical involvement in the accurate translation of messenger RNA codons during protein synthesis and, therefore, ultimately in the determination of cellular gene expression. This review aims to bring together the results of intensive investigations into the synthesis, maturation, modification, aminoacylation, editing and recycling of bacterial transfer RNAs. Codon recognition at the ribosome as well as the ever-increasing number of alternative roles for transfer RNA outside of translation will be discussed in the specific context of bacterial cells. © FEMS 2015. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Keywords:  aminoacylation; codon; modification; protein synthesis; tRNA; translation

Mesh:

Substances:

Year:  2015        PMID: 25796611      PMCID: PMC4542688          DOI: 10.1093/femsre/fuv004

Source DB:  PubMed          Journal:  FEMS Microbiol Rev        ISSN: 0168-6445            Impact factor:   16.408


  293 in total

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Journal:  Antimicrob Agents Chemother       Date:  2003-03       Impact factor: 5.191

Review 2.  RNase P RNA-mediated catalysis.

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Journal:  Biochem Soc Trans       Date:  2002-11       Impact factor: 5.407

3.  Kinetic discrimination of tRNA identity by the conserved motif 2 loop of a class II aminoacyl-tRNA synthetase.

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Journal:  Mol Cell       Date:  2007-02-23       Impact factor: 17.970

4.  Escherichia coli CAN lacks a tRNA-processing nuclease.

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Journal:  J Bacteriol       Date:  1983-10       Impact factor: 3.490

Review 5.  Colicins and other bacteriocins with established modes of action.

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Journal:  Annu Rev Microbiol       Date:  1982       Impact factor: 15.500

6.  Structure-based site-directed mutagenesis of the UDP-MurNAc-pentapeptide-binding cavity of the FemX alanyl transferase from Weissella viridescens.

Authors:  Antoine P Maillard; Sabrina Biarrotte-Sorin; Régis Villet; Stéphane Mesnage; Ahmed Bouhss; Wladimir Sougakoff; Claudine Mayer; Michel Arthur
Journal:  J Bacteriol       Date:  2005-06       Impact factor: 3.490

Review 7.  Direction of aminoacylated transfer RNAs into antibiotic synthesis and peptidoglycan-mediated antibiotic resistance.

Authors:  Jennifer Shepherd; Michael Ibba
Journal:  FEBS Lett       Date:  2013-07-29       Impact factor: 4.124

8.  The heterotrimeric Thermus thermophilus Asp-tRNA(Asn) amidotransferase can also generate Gln-tRNA(Gln).

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Journal:  FEBS Lett       Date:  2000-07-07       Impact factor: 4.124

Review 9.  tRNA modifications regulate translation during cellular stress.

Authors:  Chen Gu; Thomas J Begley; Peter C Dedon
Journal:  FEBS Lett       Date:  2014-10-07       Impact factor: 4.124

10.  Determinants of eukaryal cell killing by the bacterial ribotoxin PrrC.

Authors:  Birthe Meineke; Beate Schwer; Raffael Schaffrath; Stewart Shuman
Journal:  Nucleic Acids Res       Date:  2010-09-19       Impact factor: 16.971

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  38 in total

Review 1.  Every little piece counts: the many faces of tRNA transcripts.

Authors:  David Lalaouna; Marie-Claude Carrier; Eric Massé
Journal:  Transcription       Date:  2015

2.  A Decrease in Serine Levels during Growth Transition Triggers Biofilm Formation in Bacillus subtilis.

Authors:  Jennifer Greenwich; Alicyn Reverdy; Kevin Gozzi; Grace Di Cecco; Tommy Tashjian; Veronica Godoy-Carter; Yunrong Chai
Journal:  J Bacteriol       Date:  2019-07-10       Impact factor: 3.490

3.  The RNA degradosome promotes tRNA quality control through clearance of hypomodified tRNA.

Authors:  Satoshi Kimura; Matthew K Waldor
Journal:  Proc Natl Acad Sci U S A       Date:  2019-01-08       Impact factor: 11.205

4.  The Effects of Ultraviolet Radiation on Nucleoside Modifications in RNA.

Authors:  Congliang Sun; Manasses Jora; Beulah Solivio; Patrick A Limbach; Balasubrahmanyam Addepalli
Journal:  ACS Chem Biol       Date:  2018-02-05       Impact factor: 5.100

Review 5.  tRNA wobble modifications and protein homeostasis.

Authors:  Namit Ranjan; Marina V Rodnina
Journal:  Translation (Austin)       Date:  2016-01-28

6.  Repairing tRNA termini: News from the 3' end.

Authors:  Christiane Rammelt; Walter Rossmanith
Journal:  RNA Biol       Date:  2016-09-23       Impact factor: 4.652

7.  Distributive enzyme binding controlled by local RNA context results in 3' to 5' directional processing of dicistronic tRNA precursors by Escherichia coli ribonuclease P.

Authors:  Jing Zhao; Michael E Harris
Journal:  Nucleic Acids Res       Date:  2019-02-20       Impact factor: 16.971

Review 8.  The central role of tRNA in genetic code expansion.

Authors:  Noah M Reynolds; Oscar Vargas-Rodriguez; Dieter Söll; Ana Crnković
Journal:  Biochim Biophys Acta Gen Subj       Date:  2017-03-18       Impact factor: 3.770

9.  Gene ssfg_01967 (miaB) for tRNA modification influences morphogenesis and moenomycin biosynthesis in Streptomyces ghanaensis ATCC14672.

Authors:  Yuliia Sehin; Oksana Koshla; Yuriy Dacyuk; Ruoxia Zhao; Robert Ross; Maksym Myronovskyi; Patrick A Limbach; Andriy Luzhetskyy; Suzanne Walker; Victor Fedorenko; Bohdan Ostash
Journal:  Microbiology (Reading)       Date:  2018-12-13       Impact factor: 2.777

Review 10.  Prevalence of small base-pairing RNAs derived from diverse genomic loci.

Authors:  Philip P Adams; Gisela Storz
Journal:  Biochim Biophys Acta Gene Regul Mech       Date:  2020-03-05       Impact factor: 4.490

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