| Literature DB >> 25789207 |
Chakravarthi Kanduri1, Pirre Raijas2, Minna Ahvenainen1, Anju K Philips1, Liisa Ukkola-Vuoti1, Harri Lähdesmäki3, Irma Järvelä1.
Abstract
Although brain imaging studies have demonstrated that listening to music alters human brain structure and function, the molecular mechanisms mediating those effects remain unknown. With the advent of genomics and bioinformatics approaches, these effects of music can now be studied in a more detailed fashion. To verify whether listening to classical music has any effect on human transcriptome, we performed genome-wide transcriptional profiling from the peripheral blood of participants after listening to classical music (n = 48), and after a control study without music exposure (n = 15). As musical experience is known to influence the responses to music, we compared the transcriptional responses of musically experienced and inexperienced participants separately with those of the controls. Comparisons were made based on two subphenotypes of musical experience: musical aptitude and music education. In musically experiencd participants, we observed the differential expression of 45 genes (27 up- and 18 down-regulated) and 97 genes (75 up- and 22 down-regulated) respectively based on subphenotype comparisons (rank product non-parametric statistics, pfp 0.05, >1.2-fold change over time across conditions). Gene ontological overrepresentation analysis (hypergeometric test, FDR < 0.05) revealed that the up-regulated genes are primarily known to be involved in the secretion and transport of dopamine, neuron projection, protein sumoylation, long-term potentiation and dephosphorylation. Down-regulated genes are known to be involved in ATP synthase-coupled proton transport, cytolysis, and positive regulation of caspase, peptidase and endopeptidase activities. One of the most up-regulated genes, alpha-synuclein (SNCA), is located in the best linkage region of musical aptitude on chromosome 4q22.1 and is regulated by GATA2, which is known to be associated with musical aptitude. Several genes reported to regulate song perception and production in songbirds displayed altered activities, suggesting a possible evolutionary conservation of sound perception between species. We observed no significant findings in musically inexperienced participants.Entities:
Keywords: Dopamine; Gene expression profiling; Genomics; Long-term potentiation; Music; Peripheral blood; RNA; SNCA
Year: 2015 PMID: 25789207 PMCID: PMC4362302 DOI: 10.7717/peerj.830
Source DB: PubMed Journal: PeerJ ISSN: 2167-8359 Impact factor: 2.984
Phenotype characteristics of the sample set (total n = 48).
| Phenotype |
|
|---|---|
|
| 19 |
|
| 29 |
|
| 12 |
|
| 12 |
| Male | 22 |
| Female | 26 |
Notes.
n represents the number of participants within each category.
Figure 1Differential gene expression in experienced listeners vs ‘music-free’ controls.
Heatplot representations of mean expression values pre- and post-music listening session and control sessions. The red-yellow-green palette represents low-moderate-high expression values. (A) Educated listeners vs controls, (B) Competent listeners vs controls.
Putative biological functions of the differentially expressed genes after listening to music.
| Biological function | Gene | Direction of regulation |
|---|---|---|
| Dopamine secretion, transport, signaling |
| Up |
| Synaptic neurotransmission (Vesicular exocytosis, endocytosis) |
| Up |
| Synaptic function |
| Up |
| Learning and memory, cognitive performance |
| Up |
| Song learning and singing in songbirds |
| Up |
| Auditory cortical activation |
| Up |
| Absolute pitch |
| Up |
| Neuroprotection |
| Up |
| Neurogenesis |
| Up |
| Neuronal apoptosis |
| Down |
| ATP synthase coupled proton transport |
| Down |
Figure 2Schematic representation of chromosome 4.
The α-synuclein gene (SNCA) that was found to be up-regulated after music perception in this study is located in the best linkage region of musical aptitude as shown by Pulli et al. (2008), Park et al. (2012) and Oikkonen et al. (2014). GATA2, which is located in the best genome-wide association region of musical aptitude (Oikkonen et al., 2014) and regulates the SNCA, is also shown.