Literature DB >> 25772500

Generation and degradation of free asparagine-linked glycans.

Yoichiro Harada1, Hiroto Hirayama, Tadashi Suzuki.   

Abstract

Asparagine (N)-linked protein glycosylation, which takes place in the eukaryotic endoplasmic reticulum (ER), is important for protein folding, quality control and the intracellular trafficking of secretory and membrane proteins. It is known that, during N-glycosylation, considerable amounts of lipid-linked oligosaccharides (LLOs), the glycan donor substrates for N-glycosylation, are hydrolyzed to form free N-glycans (FNGs) by unidentified mechanisms. FNGs are also generated in the cytosol by the enzymatic deglycosylation of misfolded glycoproteins during ER-associated degradation. FNGs derived from LLOs and misfolded glycoproteins are eventually merged into one pool in the cytosol and the various glycan structures are processed to a near homogenous glycoform. This article summarizes the current state of our knowledge concerning the formation and catabolism of FNGs.

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Year:  2015        PMID: 25772500     DOI: 10.1007/s00018-015-1881-7

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  291 in total

1.  The yeast ALG11 gene specifies addition of the terminal alpha 1,2-Man to the Man5GlcNAc2-PP-dolichol N-glycosylation intermediate formed on the cytosolic side of the endoplasmic reticulum.

Authors:  J F Cipollo; R B Trimble; J H Chi; Q Yan; N Dean
Journal:  J Biol Chem       Date:  2001-02-15       Impact factor: 5.157

2.  An engineered eukaryotic protein glycosylation pathway in Escherichia coli.

Authors:  Juan D Valderrama-Rincon; Adam C Fisher; Judith H Merritt; Yao-Yun Fan; Craig A Reading; Krishan Chhiba; Christian Heiss; Parastoo Azadi; Markus Aebi; Matthew P DeLisa
Journal:  Nat Chem Biol       Date:  2012-03-25       Impact factor: 15.040

3.  The genome of the kinetoplastid parasite, Leishmania major.

Authors:  Alasdair C Ivens; Christopher S Peacock; Elizabeth A Worthey; Lee Murphy; Gautam Aggarwal; Matthew Berriman; Ellen Sisk; Marie-Adele Rajandream; Ellen Adlem; Rita Aert; Atashi Anupama; Zina Apostolou; Philip Attipoe; Nathalie Bason; Christopher Bauser; Alfred Beck; Stephen M Beverley; Gabriella Bianchettin; Katja Borzym; Gordana Bothe; Carlo V Bruschi; Matt Collins; Eithon Cadag; Laura Ciarloni; Christine Clayton; Richard M R Coulson; Ann Cronin; Angela K Cruz; Robert M Davies; Javier De Gaudenzi; Deborah E Dobson; Andreas Duesterhoeft; Gholam Fazelina; Nigel Fosker; Alberto Carlos Frasch; Audrey Fraser; Monika Fuchs; Claudia Gabel; Arlette Goble; André Goffeau; David Harris; Christiane Hertz-Fowler; Helmut Hilbert; David Horn; Yiting Huang; Sven Klages; Andrew Knights; Michael Kube; Natasha Larke; Lyudmila Litvin; Angela Lord; Tin Louie; Marco Marra; David Masuy; Keith Matthews; Shulamit Michaeli; Jeremy C Mottram; Silke Müller-Auer; Heather Munden; Siri Nelson; Halina Norbertczak; Karen Oliver; Susan O'neil; Martin Pentony; Thomas M Pohl; Claire Price; Bénédicte Purnelle; Michael A Quail; Ester Rabbinowitsch; Richard Reinhardt; Michael Rieger; Joel Rinta; Johan Robben; Laura Robertson; Jeronimo C Ruiz; Simon Rutter; David Saunders; Melanie Schäfer; Jacquie Schein; David C Schwartz; Kathy Seeger; Amber Seyler; Sarah Sharp; Heesun Shin; Dhileep Sivam; Rob Squares; Steve Squares; Valentina Tosato; Christy Vogt; Guido Volckaert; Rolf Wambutt; Tim Warren; Holger Wedler; John Woodward; Shiguo Zhou; Wolfgang Zimmermann; Deborah F Smith; Jenefer M Blackwell; Kenneth D Stuart; Bart Barrell; Peter J Myler
Journal:  Science       Date:  2005-07-15       Impact factor: 47.728

Review 4.  Understanding human glycosylation disorders: biochemistry leads the charge.

Authors:  Hudson H Freeze
Journal:  J Biol Chem       Date:  2013-01-17       Impact factor: 5.157

Review 5.  N-linked protein glycosylation in the ER.

Authors:  Markus Aebi
Journal:  Biochim Biophys Acta       Date:  2013-04-10

6.  Structure of ten free N-glycans in ripening tomato fruit. Arabinose is a constituent of a plant N-glycan.

Authors:  B Priem; R Gitti; C A Bush; K C Gross
Journal:  Plant Physiol       Date:  1993-06       Impact factor: 8.340

7.  Substrate specificity of the bovine and feline neutral alpha-mannosidases.

Authors:  R De Gasperi; S al Daher; B G Winchester; C D Warren
Journal:  Biochem J       Date:  1992-08-15       Impact factor: 3.857

8.  Cobalt-ion chelate affinity chromatography for the purification of brain neutral alpha-D-mannosidase and its separation from acid alpha-D-mannosidase.

Authors:  R Mathur; A S Balasubramanian
Journal:  Biochem J       Date:  1984-08-15       Impact factor: 3.857

Review 9.  Unconjugated N-glycans as a new class of plant oligosaccharins.

Authors:  B Priem; H Morvan; K C Gross
Journal:  Biochem Soc Trans       Date:  1994-05       Impact factor: 5.407

10.  Transitory effects of glucose starvation on the synthesis of dolichol-linked oligosaccharides in mammalian cells.

Authors:  H Gershman; P W Robbins
Journal:  J Biol Chem       Date:  1981-08-10       Impact factor: 5.157

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  14 in total

1.  Non-lysosomal Degradation of Singly Phosphorylated Oligosaccharides Initiated by the Action of a Cytosolic Endo-β-N-acetylglucosaminidase.

Authors:  Yoichiro Harada; Chengcheng Huang; Satoshi Yamaki; Naoshi Dohmae; Tadashi Suzuki
Journal:  J Biol Chem       Date:  2016-02-08       Impact factor: 5.157

2.  Free glycans derived from O-mannosylated glycoproteins suggest the presence of an O-glycoprotein degradation pathway in yeast.

Authors:  Hiroto Hirayama; Tsugiyo Matsuda; Yae Tsuchiya; Ritsuko Oka; Junichi Seino; Chengcheng Huang; Kazuki Nakajima; Yoichi Noda; Yuichi Shichino; Shintaro Iwasaki; Tadashi Suzuki
Journal:  J Biol Chem       Date:  2019-07-16       Impact factor: 5.157

Review 3.  The cytoplasmic peptide:N-glycanase (NGLY1) - Structure, expression and cellular functions.

Authors:  Tadashi Suzuki; Chengcheng Huang; Haruhiko Fujihira
Journal:  Gene       Date:  2015-11-30       Impact factor: 3.688

4.  Mammalian STT3A/B oligosaccharyltransferases segregate N-glycosylation at the translocon from lipid-linked oligosaccharide hydrolysis.

Authors:  Hua Lu; Charles S Fermaintt; Natalia A Cherepanova; Reid Gilmore; Nan Yan; Mark A Lehrman
Journal:  Proc Natl Acad Sci U S A       Date:  2018-09-04       Impact factor: 11.205

5.  Structural Analysis of Free N-Glycans in α-Glucosidase Mutants of Saccharomyces cerevisiae: Lack of the Evidence for the Occurrence of Catabolic α-Glucosidase Acting on the N-Glycans.

Authors:  Tanim Jabid Hossain; Yoichiro Harada; Hiroto Hirayama; Haruna Tomotake; Akira Seko; Tadashi Suzuki
Journal:  PLoS One       Date:  2016-03-24       Impact factor: 3.240

6.  Lethality of mice bearing a knockout of the Ngly1-gene is partially rescued by the additional deletion of the Engase gene.

Authors:  Haruhiko Fujihira; Yuki Masahara-Negishi; Masaru Tamura; Chengcheng Huang; Yoichiro Harada; Shigeharu Wakana; Daisuke Takakura; Nana Kawasaki; Naoyuki Taniguchi; Gen Kondoh; Tadashi Yamashita; Yoko Funakoshi; Tadashi Suzuki
Journal:  PLoS Genet       Date:  2017-04-20       Impact factor: 5.917

7.  A bioactive mammalian disaccharide associated with autoimmunity activates STING-TBK1-dependent immune response.

Authors:  Charles S Fermaintt; Kanae Sano; Zhida Liu; Nozomi Ishii; Junichi Seino; Nicole Dobbs; Tadashi Suzuki; Yang-Xin Fu; Mark A Lehrman; Ichiro Matsuo; Nan Yan
Journal:  Nat Commun       Date:  2019-05-30       Impact factor: 14.919

Review 8.  Oligosaccharyltransferase: A Gatekeeper of Health and Tumor Progression.

Authors:  Yoichiro Harada; Yuki Ohkawa; Yasuhiko Kizuka; Naoyuki Taniguchi
Journal:  Int J Mol Sci       Date:  2019-12-02       Impact factor: 5.923

9.  Protocol for analyzing the biosynthesis and degradation of N-glycan precursors in mammalian cells.

Authors:  Yoichiro Harada; Kazuki Nakajima; Shengtao Li; Tadashi Suzuki; Naoyuki Taniguchi
Journal:  STAR Protoc       Date:  2021-02-03

10.  Cryo-EM structure of fission yeast tetrameric α-mannosidase Ams1.

Authors:  Jianxiu Zhang; Ying-Ying Wang; Li-Lin Du; Keqiong Ye
Journal:  FEBS Open Bio       Date:  2020-10-20       Impact factor: 2.792

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