Literature DB >> 25757544

A single protocol for extraction of gDNA from bacteria and yeast.

Laurie Vingataramin1, Eric H Frost1.   

Abstract

Guanidine thiocyanate breakage of microorganisms has been the standard initial step in genomic DNA (gDNA) extraction of microbial DNA for two decades, despite the requirement for pretreatments to extract DNA from microorganisms other than Gram-negative bacteria. We report a quick and low-cost gDNA extraction protocol called EtNa that is efficient for bacteria and yeast over a broad range of concentrations. EtNa is based on a hot alkaline ethanol lysis. The solution can be immediately centrifuged to yield a crude gDNA extract suitable for PCR, or it can be directly applied to a silica column for purification.

Entities:  

Keywords:  DNA amplification; DNA extraction; PCR; bacteria, yeast

Mesh:

Substances:

Year:  2015        PMID: 25757544     DOI: 10.2144/000114263

Source DB:  PubMed          Journal:  Biotechniques        ISSN: 0736-6205            Impact factor:   1.993


  12 in total

1.  Staphylococcus pasteuri (BCVME2) Resident in Buffalo Cervical Vaginal Mucus: A Potential Source of Estrus-Specific Sex Pheromone(s).

Authors:  Mahalingam Srinivasan; Rengasamy Lakshminarayanan Rengarajan; Dharmadurai Dhanasekaran; Mohammad Abdulkader Akbarsha; Govindaraju Archunan
Journal:  J Chem Ecol       Date:  2021-09-20       Impact factor: 2.626

2.  A modified approach for high-quality RNA extraction of spore-forming Bacillus subtilis at varied physiological stages.

Authors:  Phetcharat Jaiaue; Piroonporn Srimongkol; Sitanan Thitiprasert; Somboon Tanasupawat; Benjamas Cheirsilp; Suttichai Assabumrungrat; Nuttha Thongchul
Journal:  Mol Biol Rep       Date:  2021-08-28       Impact factor: 2.316

3.  Reproductive Span of Caenorhabditis Elegans is Extended by Microbacterium Sp.

Authors:  Tho Son Le; Thi Hong Gam Nguyen; Bich Hong Ha; Bui Thi Mai Huong; Thi Thu Hang Nguyen; Kim Dung Vu; Tu Cuong Ho; John Wang
Journal:  J Nematol       Date:  2022-05-10       Impact factor: 1.481

4.  Investigation of Conditions for Capture of Live Legionella pneumophila with Polyclonal and Recombinant Antibodies.

Authors:  Lucas Paladines; Walid M Hassen; Juliana Chawich; Stefan Dübel; Simon Lévesque; Jan J Dubowski; Eric H Frost
Journal:  Biosensors (Basel)       Date:  2022-05-31

5.  First Report of blaNDM-1 Bearing IncX3 Plasmid in Clinically Isolated ST11 Klebsiella pneumoniae from Pakistan.

Authors:  Hazrat Bilal; Gaojian Zhang; Tayyab Rehman; Jianxion Han; Sabir Khan; Muhammad Shafiq; Xuegang Yang; Zhongkang Yan; Xingyuan Yang
Journal:  Microorganisms       Date:  2021-04-28

6.  Bacterial microbiome of the nose of healthy dogs and dogs with nasal disease.

Authors:  Barbara Tress; Elisabeth S Dorn; Jan S Suchodolski; Tariq Nisar; Prajesh Ravindran; Karin Weber; Katrin Hartmann; Bianka S Schulz
Journal:  PLoS One       Date:  2017-05-01       Impact factor: 3.240

7.  Bacterial microbiome in the nose of healthy cats and in cats with nasal disease.

Authors:  Elisabeth S Dorn; Barbara Tress; Jan S Suchodolski; Tariq Nisar; Prajesh Ravindran; Karin Weber; Katrin Hartmann; Bianka S Schulz
Journal:  PLoS One       Date:  2017-06-29       Impact factor: 3.240

8.  A guideline for reporting experimental protocols in life sciences.

Authors:  Olga Giraldo; Alexander Garcia; Oscar Corcho
Journal:  PeerJ       Date:  2018-05-28       Impact factor: 2.984

9.  Activation of LacZ gene in Escherichia coli DH5α via α-complementation mechanism for β-galactosidase production and its biochemical characterizations.

Authors:  Ahmed A Hamed; Mohamed Khedr; Mohamed Abdelraof
Journal:  J Genet Eng Biotechnol       Date:  2020-12-02

10.  Functional strain redundancy and persistent phage infection in Swiss hard cheese starter cultures.

Authors:  Vincent Somerville; Hélène Berthoud; Remo S Schmidt; Hans-Peter Bachmann; Yi Hélène Meng; Pascal Fuchsmann; Ueli von Ah; Philipp Engel
Journal:  ISME J       Date:  2021-08-06       Impact factor: 10.302

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.