Literature DB >> 25753707

Eukaryotic glycosylation: online methods for site prediction on protein sequences.

Hiren J Joshi1, Ramneek Gupta.   

Abstract

This chapter runs through several online predictors enabling prediction of glycosylation sites on protein sequences. Most online methods provide in place documentation and examples, but this chapter provides a general overview and workflow for each method.

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Year:  2015        PMID： 25753707     DOI： 10.1007/978-1-4939-2343-4_9

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN： 1064-3745


  7 in total

1.  Identification of sequence variants influencing immunoglobulin levels.

Authors:  Stefan Jonsson; Gardar Sveinbjornsson; Aitzkoa Lopez de Lapuente Portilla; Bhairavi Swaminathan; Rosina Plomp; Gillian Dekkers; Ram Ajore; Mina Ali; Arthur E H Bentlage; Evelina Elmér; Gudmundur I Eyjolfsson; Sigurjon A Gudjonsson; Urban Gullberg; Arnaldur Gylfason; Bjarni V Halldorsson; Markus Hansson; Hilma Holm; Åsa Johansson; Ellinor Johnsson; Aslaug Jonasdottir; Bjorn R Ludviksson; Asmundur Oddsson; Isleifur Olafsson; Sigurgeir Olafsson; Olof Sigurdardottir; Asgeir Sigurdsson; Lilja Stefansdottir; Gisli Masson; Patrick Sulem; Manfred Wuhrer; Anna-Karin Wihlborg; Gudmar Thorleifsson; Daniel F Gudbjartsson; Unnur Thorsteinsdottir; Gestur Vidarsson; Ingileif Jonsdottir; Björn Nilsson; Kari Stefansson
Journal:  Nat Genet       Date:  2017-06-19       Impact factor: 38.330

2.  circRNADb: A comprehensive database for human circular RNAs with protein-coding annotations.

Authors:  Xiaoping Chen; Ping Han; Tao Zhou; Xuejiang Guo; Xiaofeng Song; Yan Li
Journal:  Sci Rep       Date:  2016-10-11       Impact factor: 4.379

3.  Glycosylation of Hemagglutinin and Neuraminidase of Influenza A Virus as Signature for Ecological Spillover and Adaptation among Influenza Reservoirs.

Authors:  Paul Kim; Yo Han Jang; Soon Bin Kwon; Chung Min Lee; Gyoonhee Han; Baik Lin Seong
Journal:  Viruses       Date:  2018-04-07       Impact factor: 5.048

4.  Deciphering transmission dynamics and spillover of avian influenza viruses from avian species to swine populations globally.

Authors:  Ravendra P Chauhan; Michelle L Gordon
Journal:  Virus Genes       Date:  2021-10-08       Impact factor: 2.332

Review 5.  Emerging glycobiology tools: A renaissance in accessibility.

Authors:  Douglas M Oswald; Brian A Cobb
Journal:  Cell Immunol       Date:  2018-04-25       Impact factor: 4.178

6.  Prediction of O-glycosylation Sites Using Random Forest and GA-Tuned PSO Technique.

Authors:  Hebatallah Hassan; Amr Badr; M B Abdelhalim
Journal:  Bioinform Biol Insights       Date:  2015-07-05

7.  Heterologous expression and characterization of an Arabidopsis β-l-arabinopyranosidase and α-d-galactosidases acting on β-l-arabinopyranosyl residues.

Authors:  Chiemi Imaizumi; Harumi Tomatsu; Kiminari Kitazawa; Yoshihisa Yoshimi; Seiji Shibano; Kaoru Kikuchi; Masatoshi Yamaguchi; Satoshi Kaneko; Yoichi Tsumuraya; Toshihisa Kotake
Journal:  J Exp Bot       Date:  2017-07-20       Impact factor: 6.992
  7 in total

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