Literature DB >> 25749893

Probabilistic approach to lysozyme crystal nucleation kinetics.

Ivaylo L Dimitrov1, Feyzim V Hodzhaoglu, Dobryana P Koleva.   

Abstract

Nucleation of lysozyme crystals in quiescent solutions at a regime of progressive nucleation is investigated under an optical microscope at conditions of constant supersaturation. A method based on the stochastic nature of crystal nucleation and using discrete time sampling of small solution volumes for the presence or absence of detectable crystals is developed. It allows probabilities for crystal detection to be experimentally estimated. One hundred single samplings were used for each probability determination for 18 time intervals and six lysozyme concentrations. Fitting of a particular probability function to experimentally obtained data made possible the direct evaluation of stationary rates for lysozyme crystal nucleation, the time for growth of supernuclei to a detectable size and probability distribution of nucleation times. Obtained stationary nucleation rates were then used for the calculation of other nucleation parameters, such as the kinetic nucleation factor, nucleus size, work for nucleus formation and effective specific surface energy of the nucleus. The experimental method itself is simple and adaptable and can be used for crystal nucleation studies of arbitrary soluble substances with known solubility at particular solution conditions.

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Year:  2015        PMID: 25749893      PMCID: PMC4550622          DOI: 10.1007/s10867-015-9381-4

Source DB:  PubMed          Journal:  J Biol Phys        ISSN: 0092-0606            Impact factor:   1.365


  6 in total

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Authors:  A M Kierzek; P Zielenkiewicz
Journal:  Biophys Chem       Date:  2001-06-15       Impact factor: 2.352

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Authors:  Alexander A Chernov
Journal:  J Struct Biol       Date:  2003-04       Impact factor: 2.867

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Authors:  E Forsythe; F Ewing; M Pusey
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1994-07-01

4.  Pre-assembled clusters distort crystal nucleation kinetics in supersaturated lysozyme solutions.

Authors:  Avanish S Parmar; Paul E Gottschall; Martin Muschol
Journal:  Biophys Chem       Date:  2007-06-09       Impact factor: 2.352

5.  Crystal structure of hen egg-white lysozyme at a hydrostatic pressure of 1000 atmospheres.

Authors:  C E Kundrot; F M Richards
Journal:  J Mol Biol       Date:  1987-01-05       Impact factor: 5.469

6.  Measuring the nucleation rate of Lysozyme using microfluidics.

Authors:  Seila Selimović; Yanwei Jia; Seth Fraden
Journal:  Cryst Growth Des       Date:  2009-04-01       Impact factor: 4.076

  6 in total
  1 in total

1.  Kinetic factors may reshape the dependence of crystal nucleation rate on temperature in protein bulk solution.

Authors:  Ivaylo L Dimitrov
Journal:  J Biol Phys       Date:  2020-10-16       Impact factor: 1.365

  1 in total

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