Literature DB >> 25737335

Seasonal variation of postmortem microbial communities.

David O Carter1, Jessica L Metcalf, Alexander Bibat, Rob Knight.   

Abstract

Body-associated microbes were recently shown to change significantly during decomposition, undergoing an ecological succession in experimental conditions using rodent and swine models. We investigated microbial succession in soils associated with swine carcasses under experimental field conditions in summer and winter. We demonstrate that these postmortem microbial communities change in a specific, reproducible fashion, and that soil microbes represent a significant component of the postmortem microbial community, contrary to widespread belief in forensic science. However, the effects of decomposition on soil microbial communities were different in summer and winter. We suggest that the microbial ecological succession will be useful in medicolegal death investigation; however, observations in winter might not be applicable to summer, which indicates a need for a greater understanding of the seasonality of decomposition.

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Year:  2015        PMID: 25737335     DOI: 10.1007/s12024-015-9667-7

Source DB:  PubMed          Journal:  Forensic Sci Med Pathol        ISSN: 1547-769X            Impact factor:   2.007


  13 in total

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Authors: 
Journal:  Trends Ecol Evol       Date:  1999-06       Impact factor: 17.712

2.  Moisture can be the dominant environmental parameter governing cadaver decomposition in soil.

Authors:  David O Carter; David Yellowlees; Mark Tibbett
Journal:  Forensic Sci Int       Date:  2010-04-18       Impact factor: 2.395

3.  The elusive universal post-mortem interval formula.

Authors:  Arpad A Vass
Journal:  Forensic Sci Int       Date:  2011-01-30       Impact factor: 2.395

Review 4.  Cadaver decomposition in terrestrial ecosystems.

Authors:  David O Carter; David Yellowlees; Mark Tibbett
Journal:  Naturwissenschaften       Date:  2006-11-08

5.  Seasonal variation of carcass decomposition and gravesoil chemistry in a cold (Dfa) climate.

Authors:  Jessica Meyer; Brianna Anderson; David O Carter
Journal:  J Forensic Sci       Date:  2013-07-03       Impact factor: 1.832

6.  Reconstructing the microbial diversity and function of pre-agricultural tallgrass prairie soils in the United States.

Authors:  Noah Fierer; Joshua Ladau; Jose C Clemente; Jonathan W Leff; Sarah M Owens; Katherine S Pollard; Rob Knight; Jack A Gilbert; Rebecca L McCulley
Journal:  Science       Date:  2013-11-01       Impact factor: 47.728

7.  Seasonal necrophagous insect community assembly during vertebrate carrion decomposition.

Authors:  M E Benbow; A J Lewis; J K Tomberlin; J L Pechal
Journal:  J Med Entomol       Date:  2013-03       Impact factor: 2.278

8.  Vertebrate decomposition is accelerated by soil microbes.

Authors:  Christian L Lauber; Jessica L Metcalf; Kyle Keepers; Gail Ackermann; David O Carter; Rob Knight
Journal:  Appl Environ Microbiol       Date:  2014-06-06       Impact factor: 4.792

9.  QIIME allows analysis of high-throughput community sequencing data.

Authors:  J Gregory Caporaso; Justin Kuczynski; Jesse Stombaugh; Kyle Bittinger; Frederic D Bushman; Elizabeth K Costello; Noah Fierer; Antonio Gonzalez Peña; Julia K Goodrich; Jeffrey I Gordon; Gavin A Huttley; Scott T Kelley; Dan Knights; Jeremy E Koenig; Ruth E Ley; Catherine A Lozupone; Daniel McDonald; Brian D Muegge; Meg Pirrung; Jens Reeder; Joel R Sevinsky; Peter J Turnbaugh; William A Walters; Jeremy Widmann; Tanya Yatsunenko; Jesse Zaneveld; Rob Knight
Journal:  Nat Methods       Date:  2010-04-11       Impact factor: 28.547

10.  The living dead: bacterial community structure of a cadaver at the onset and end of the bloat stage of decomposition.

Authors:  Embriette R Hyde; Daniel P Haarmann; Aaron M Lynne; Sibyl R Bucheli; Joseph F Petrosino
Journal:  PLoS One       Date:  2013-10-30       Impact factor: 3.240

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  14 in total

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2.  A Machine Learning Approach for Using the Postmortem Skin Microbiome to Estimate the Postmortem Interval.

Authors:  Hunter R Johnson; Donovan D Trinidad; Stephania Guzman; Zenab Khan; James V Parziale; Jennifer M DeBruyn; Nathan H Lents
Journal:  PLoS One       Date:  2016-12-22       Impact factor: 3.240

Review 3.  Abiotic and Biotic Factors Regulating Inter-Kingdom Engagement between Insects and Microbe Activity on Vertebrate Remains.

Authors:  Heather R Jordan; Jeffery K Tomberlin
Journal:  Insects       Date:  2017-05-24       Impact factor: 2.769

4.  Microbiome Data Accurately Predicts the Postmortem Interval Using Random Forest Regression Models.

Authors:  Aeriel Belk; Zhenjiang Zech Xu; David O Carter; Aaron Lynne; Sibyl Bucheli; Rob Knight; Jessica L Metcalf
Journal:  Genes (Basel)       Date:  2018-02-16       Impact factor: 4.096

5.  Experimental evaluation on the applicability of necrobiome analysis in forensic veterinary science.

Authors:  Fabiola Tuccia; Emad Zurgani; Sara Bortolini; Stefano Vanin
Journal:  Microbiologyopen       Date:  2019-03-12       Impact factor: 3.139

Review 6.  The Thanatomicrobiome: A Missing Piece of the Microbial Puzzle of Death.

Authors:  Gulnaz T Javan; Sheree J Finley; Zain Abidin; Jennifer G Mulle
Journal:  Front Microbiol       Date:  2016-02-24       Impact factor: 5.640

7.  Temporal dynamics of microbiota before and after host death.

Authors:  David Preiswerk; Jean-Claude Walser; Dieter Ebert
Journal:  ISME J       Date:  2018-06-04       Impact factor: 10.302

8.  Characterizing forensically important insect and microbial community colonization patterns in buried remains.

Authors:  Lavinia Iancu; Emily N Junkins; Georgiana Necula-Petrareanu; Cristina Purcarea
Journal:  Sci Rep       Date:  2018-10-19       Impact factor: 4.379

9.  Soil nematode functional diversity, successional patterns, and indicator taxa associated with vertebrate decomposition hotspots.

Authors:  Lois S Taylor; Gary Phillips; Ernest C Bernard; Jennifer M DeBruyn
Journal:  PLoS One       Date:  2020-11-04       Impact factor: 3.240

10.  Bone biodeterioration-The effect of marine and terrestrial depositional environments on early diagenesis and bone bacterial community.

Authors:  Anne Marie Høier Eriksen; Tue Kjærgaard Nielsen; Henning Matthiesen; Christian Carøe; Lars Hestbjerg Hansen; David John Gregory; Gordon Turner-Walker; Matthew James Collins; M Thomas P Gilbert
Journal:  PLoS One       Date:  2020-10-15       Impact factor: 3.240

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