| Literature DB >> 25736709 |
Haruka Shoji1, Yukiko Kiniwa, Ryuhei Okuyama, Mu Yang, Keiichi Higuchi, Masayuki Mori.
Abstract
The original pink-eyed dilution (p) on chromosome 7 is a very old spontaneous mutation in mice. The oculocutaneous albinism II (Oca2) gene has previously been identified as the p gene. Oca2 transcripts have been shown to be absent in the skin of SJL/J mice with the original p mutant allele (Oca2(p)); however, the molecular genetic lesion underlying the original Oca2(p) allele has never been reported. The NCT mouse (commonly known as Nakano cataract mouse) has a pink-eyed dilution phenotype, which prompted us to undertake a molecular genetic analysis of the Oca2 gene of this strain. Our genetic linkage analysis suggests that the locus for the pink-eyed dilution phenotype of NCT is tightly linked to the Oca2 locus. PCR cloning and nucleotide sequence analysis indicates that the NCT mouse has a nonsense nucleotide substitution at exon 7 of the Oca2 gene. Examination of three mouse strains (NZW/NSlc, SJL/J, and 129X1/SvJJmsSlc) with the original Oca2(p) allele revealed the presence of a nonsense nucleotide substitution identical to that in the NCT strain. RT-PCR analysis revealed that the Oca2 transcripts were absent in the skin of NCT mice, suggesting intervention of the nonsense-mediated mRNA decay pathway. Collectively, the data in this study indicate that the nonsense nucleotide substitution in the Oca2 gene underlies the Oca2(p) allele. Our data also indicate that the NCT mouse can be used not only as a cataract model, but also as a model for human type II oculocutaneous albinism.Entities:
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Year: 2015 PMID: 25736709 PMCID: PMC4427732 DOI: 10.1538/expanim.14-0075
Source DB: PubMed Journal: Exp Anim ISSN: 0007-5124
Nucleotide sequence of oligonucleotide primers used for analysis of the mouse Oca2 gene
| Target | Forwad primer | Reverse primer |
|---|---|---|
| Exon 1 | 5′-GGAAAGCAGCTCCCTTGGCT-3′ | 5′-TTACCCTACTAGCTTCCCAG-3′ |
| Exon 2 | 5′-GGAGACACCCACATACTGTC-3′ | 5′-GCCCATCATGAAGGGATTAGTACCCA-3′ |
| Exon 3 | 5′-AGTGCACTCCTGCAAGCATC-3′ | 5′-GCCTGTCAAAGATCTGACAG-3′ |
| Exon 4 | 5′-CTGTCTTGTAGACATGCTCAG-3′ | 5′-GCTAACAGAAGCTATGTGCAGCC-3′ |
| Exon 5 | 5′-GCCATGTCATGCATACTCAGTG-3′ | 5′-GTCCCAACATAGGCTCTCTTG-3′ |
| Exon 6 | 5′-CAATCAAGGCTCATCGCAGC-3′ | 5′-GACCTTTGAGAAGCCTGAACCT-3′ |
| Exon 7 | 5′-CAGTGGTAAGCAGGCCAAGT-3′ | 5′-CCGTTGGCTTCCATCAAATCC-3′ |
| Exon 8 | 5′-CCCACAGGTTCTACATTCAAGG-3′ | 5′-GTGCTATCAGACTTCTCCAG-3′ |
| Exon 9 | 5′-CAGGTCTGTACTCAGGGCTTTTC-3′ | 5′-CCTAGAATCCGTAGGAATTGCTCC-3′ |
| Exon 10 | 5′-GAGCATCCTTTCACAGTCAC-3′ | 5′-ATGCCTCTATGAATTGTGGGCC-3′ |
| Exon 11 | 5′-CAATGTCTGCGCTTGCAGTAAG-3′ | 5′-GATAGGATCAGCAACTGTGGG-3′ |
| Exon 12 | 5′-GCTTCAAGACTGATCAAGCC-3′ | 5′-GGTCTTGATGTGTAGCCCTAAC-3′ |
| Exon 13 | 5′-GATAAGGAGACCTTGGCACAC-3′ | 5′-CATTTGCTCCAAACTTGGCC-3′ |
| Exon 14 | 5′-CGATGTGCCTTCCTGTACAAG-3′ | 5′-GCAAGAACCTTGGTTCACAG-3′ |
| Exon 15 | 5′-GTCATGTAAGCACTGGCTTTTC-3′ | 5′-CTAAGAATGCAGCATCCCAGG-3′ |
| Exon 16 | 5′-GCTTCCACGATGACTTTCAGAG-3′ | 5′-C-CTTCTGCTAAGTTGCTACACTG3′ |
| Exon 17 | 5′-CTTACAAGGCTGTGCCAGGATCCAC-3′ | 5′-GCCATGATTCAGAATGCCTTG-3′ |
| Exon 18 | 5′-CCTCTGAGGGACTCATAGGA-3′ | 5′-CACAGCAGCCTTTGGTACAG-3′ |
| Exon 19 | 5′-CTATCGAGACAAGAGAAGGCTG-3′ | 5′-GCCTTAGGCTTCACTCTGCAAAC-3′ |
| Exon 20 | 5′-GAAAGGATAACCTGTGCCTACC-3′ | 5′-CATCTCTAGGTTACCCAGGG-3′ |
| Exon 21 | 5′-CCAAGGTATAGGTATGGCCC-3′ | 5′-CAACAGAGGAGCTGGTTTCATGCC-3′ |
| Exon 22 | 5′-GCCAGTGCATTTAACGGCTG-3′ | 5′-GGAAGTCTCCAGGATTCTCC-3′ |
| Exon 23 | 5′-GGGACCTTCTCCTTAGCATC-3′ | 5′-GTGCCTTGATCTGAGCTCATC-3′ |
| Exon 24 | 5′-CCTTACGTAAAGATTCTGGGGC-3′ | 5′-GCCATGTATATCATGGTGAGC-3′ |
| cDNA (Set 1) | 5′-CTGGAAAACTACTCTGTGAACCTC-3′ | 5′-AGCCTCCCTGCTCACTATCT-3′ |
| cDNA (Set 2) | 5′-CCAGAAGATCAGCGCTTTGC-3′ | 5′-GGAGATAGCACATCCCAATG-3′ |
| 5′-TGAACAATGGCTGCGAAGGC-3′ | 5′-GCAGCAATAACAGCTCCCAC-3′ |
Fig. 1.Image of C57BL/6J, NCT, and BALB/c mice at 2 weeks (A) and 12 weeks (B) of age. Note that the NCT mice exhibit pink-eyed dilute coat color phenotype. The 12-week-old NCT has also cataracts.
Fig. 2.(A) Hematoxylin and eosin staining of the dorsal dermis of 12-week-old C57BL/6J and NCT mice (original magnification ×400). Melanin granules in hair bulb are indicated by arrows. (B) Immunohistochemical staining of TRP1 in the dorsal dermis of 12-week-old C57BL/6J and NCT mice (original magnification ×400). (C) Comparison of hair melanin levels between 12-week-old C57BL/6J, NCT, and BALB/c (mean ± SD; n = 3).
Fig. 3.Genetic linkage of pink-eyed dilution and a D7Mit346 marker locus. Only the data for 16 (BALB.NCT-Cpox × NCT)F1 × NCT backcross mice are shown. B and N stand for BALB.NCT-Cpox and NCT mice, respectively. Ho and He stand for the homozygous and heterozygous states at the D7Mit346 marker locus, respectively. P and W stand for pink-eyed dilution and wild-type phenotypes, respectively. Note that there is 100% concordance between the pink-eyed dilution phenotype and homozygosity for the NCT allele of D7Mit346.
List of nucleotide alteration found in the Oca2 gene of mouse strains with the original Oca2 allele
| RGCm38 | Position | Reference | NCT | NZW/ | SJL/J | 129X1/ | Effect | SNP reference |
|---|---|---|---|---|---|---|---|---|
| 56,239,117 | Upstream | G | A | A | A | A | rs32975435 | |
| 56,239,155 | Upstream | C | T | T | T | T | rs32975437 | |
| 56,239,216 | Upstream | T | G | G | G | G | rs32975438 | |
| 56,239,238 | Upstream | T | C | C | C | C | rs46887862 | |
| 56,239,239 | Upstream | T | A | A | A | A | rs50866175 | |
| 56,239,254 | Upstream | G | T | T | T | T | rs50711255 | |
| 56,239,277 | Upstream | T | C | C | C | C | rs32975439 | |
| 56,239,299 | Upstream | G | A | A | A | A | rs108518501 | |
| 56,239,318 | Upstream | A | G | G | G | G | rs32975440 | |
| 56,239,329 | Upstream | A | G | G | G | G | rs32975441 | |
| 56,239,404 | Upstream | G | C | C | C | C | rs32975443 | |
| 56,239,413 | Upstream | T | C | C | C | C | rs49155013 | |
| 56,239,448 | Upstream | A | C | C | C | C | rs32976114 | |
| 56,239,488 | Upstream | G | A | A | A | A | rs32976116 | |
| 56,239,538 | Upstream | C | T | T | T | T | rs32976117 | |
| 56,239,604 | Upstream | T | A | A | A | A | rs50836782 | |
| 56,239,607 | Upstream | A | G | G | G | G | rs50507765 | |
| 56,239,626 | Upstream | T | C | C | C | C | rs32976118 | |
| 56,239,800 | exon 1 | G | A | A | A | A | non-coding | rs32976120 |
| 56,239,830 | exon 1 | T | G | G | G | G | non-coding | rs32976121 |
| 56,239,850 | exon 1 | T | C | C | C | C | non-coding | rs32976122 |
| 56,254,868 | exon 2 | C | T | T | T | T | silent | rs32975605 |
| 56,254,910 | exon 2 | T | C | C | C | C | silent | rs32065217 |
| 56,280,859 | exon 4 | T | A | A | A | A | silent | rs51221903 |
| 56,293,785 | exon 7 | A | T | T | T | T | silent | rs32980939 |
| 56,293,847 | exon 7 | C | T | T | T | T | missense (p.A256V) | rs32980940 |
| 56,293,864 | exon 7 | C | T | T | T | T | nonsense (p.R262X) | rs32980941 |
| 56,295,441 | exon 8 | C | G | G | G | G | missense (p.L266V) | rs31110637 |
| 56,295,446 | exon 8 | C | T | T | T | T | silent | rs31471555 |
| 56,295,506 | exon 8 | T | C | C | C | C | silent | rs32976441 |
| 56,297,217 | exon 9 | A | C | C | C | C | silent | rs31936191 |
| 56,324,663 | exon 14 | A | G | G | G | G | silent | rs50144561 |
| 56,327,313 | exon 15 | G | C | C | C | C | silent | rs50712907 |
| 56,328,831 | exon 16 | T | C | C | C | C | silent | rs32977966 |
| 56,413,733 | exon 20 | A | T | T | T | T | silent | rs32979629 |
| 56,429,368 | exon 23 | A | C | C | C | C | missense (p.K794Q) | rs31090430 |
| 56,535,958 | exon 24 | G | A | A | A | A | missense (p.V811M) | rs32985345 |
Fig. 4.Sequence chromatograms of the PCR products corresponding to a portion of exon 7 of the Oca2 gene from BALB.NCT-Cpox and NCT mice. Amino acid sequences encoded by the nucleotide sequences are also shown. Nucleotide substitutions in NCT are indicated by arrows.
Fig. 5.(A) Agarose gel image of the RT-PCR products for Oca2 and Tyr (internal control) mRNA derived from the skin of C57BL/6J, NCT, and (C57BL/6J × NCT)F1 (F1) mice. (B) Sequence chromatograms of the RT-PCR products for Oca2 from C57BL/6J and (C57BL/6J × NCT)F1 (F1) mice. Overlaps of 2 different nucleotides are indicated by arrows.