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Literature DB >> 25733351

Concepts in solid tumor evolution.

Abstract

Evolutionary mechanisms in cancer progression give tumors their individuality. Cancer evolution is different from organismal evolution, however, and we discuss where concepts from evolutionary genetics are useful or limited in facilitating an understanding of cancer. Based on these concepts we construct and apply the simplest plausible model of tumor growth and progression. Simulations using this simple model illustrate the importance of stochastic events early in tumorigenesis, highlight the dominance of exponential growth over linear growth and differentiation, and explain the clonal substructure of tumors.

Entities: Disease Gene Species

Mesh：

Year: 2015 PMID： 25733351 PMCID： PMC4380537 DOI： 10.1016/j.tig.2015.02.001

Source DB: PubMed Journal: Trends Genet ISSN： 0168-9525 Impact factor: 11.639

36 in total

1. Intratumor heterogeneity in human glioblastoma reflects cancer evolutionary dynamics.

Authors: Andrea Sottoriva; Inmaculada Spiteri; Sara G M Piccirillo; Anestis Touloumis; V Peter Collins; John C Marioni; Christina Curtis; Colin Watts; Simon Tavaré
Journal: Proc Natl Acad Sci U S A Date: 2013-02-14 Impact factor: 11.205

2. Punctuated evolution of prostate cancer genomes.

Authors: Sylvan C Baca; Davide Prandi; Michael S Lawrence; Juan Miguel Mosquera; Alessandro Romanel; Yotam Drier; Kyung Park; Naoki Kitabayashi; Theresa Y MacDonald; Mahmoud Ghandi; Eliezer Van Allen; Gregory V Kryukov; Andrea Sboner; Jean-Philippe Theurillat; T David Soong; Elizabeth Nickerson; Daniel Auclair; Ashutosh Tewari; Himisha Beltran; Robert C Onofrio; Gunther Boysen; Candace Guiducci; Christopher E Barbieri; Kristian Cibulskis; Andrey Sivachenko; Scott L Carter; Gordon Saksena; Douglas Voet; Alex H Ramos; Wendy Winckler; Michelle Cipicchio; Kristin Ardlie; Philip W Kantoff; Michael F Berger; Stacey B Gabriel; Todd R Golub; Matthew Meyerson; Eric S Lander; Olivier Elemento; Gad Getz; Francesca Demichelis; Mark A Rubin; Levi A Garraway
Journal: Cell Date: 2013-04-25 Impact factor: 41.582

3. APOBEC3B is an enzymatic source of mutation in breast cancer.

Authors: Michael B Burns; Lela Lackey; Michael A Carpenter; Anurag Rathore; Allison M Land; Brandon Leonard; Eric W Refsland; Delshanee Kotandeniya; Natalia Tretyakova; Jason B Nikas; Douglas Yee; Nuri A Temiz; Duncan E Donohue; Rebecca M McDougle; William L Brown; Emily K Law; Reuben S Harris
Journal: Nature Date: 2013-02-06 Impact factor: 49.962

Review 4. Cancer genome landscapes.

Authors: Bert Vogelstein; Nickolas Papadopoulos; Victor E Velculescu; Shibin Zhou; Luis A Diaz; Kenneth W Kinzler
Journal: Science Date: 2013-03-29 Impact factor: 47.728

5. Half or more of the somatic mutations in cancers of self-renewing tissues originate prior to tumor initiation.

Authors: Cristian Tomasetti; Bert Vogelstein; Giovanni Parmigiani
Journal: Proc Natl Acad Sci U S A Date: 2013-01-23 Impact factor: 11.205

6. Genomic landscape of non-small cell lung cancer in smokers and never-smokers.

Authors: Ramaswamy Govindan; Li Ding; Malachi Griffith; Janakiraman Subramanian; Nathan D Dees; Krishna L Kanchi; Christopher A Maher; Robert Fulton; Lucinda Fulton; John Wallis; Ken Chen; Jason Walker; Sandra McDonald; Ron Bose; David Ornitz; Donghai Xiong; Ming You; David J Dooling; Mark Watson; Elaine R Mardis; Richard K Wilson
Journal: Cell Date: 2012-09-14 Impact factor: 41.582

7. Diverse mechanisms of somatic structural variations in human cancer genomes.

Authors: Lixing Yang; Lovelace J Luquette; Nils Gehlenborg; Ruibin Xi; Psalm S Haseley; Chih-Heng Hsieh; Chengsheng Zhang; Xiaojia Ren; Alexei Protopopov; Lynda Chin; Raju Kucherlapati; Charles Lee; Peter J Park
Journal: Cell Date: 2013-05-09 Impact factor: 41.582

8. Comprehensive molecular portraits of human breast tumours.

Authors:
Journal: Nature Date: 2012-09-23 Impact factor: 49.962

9. Genome evolution during progression to breast cancer.

Authors: Daniel E Newburger; Dorna Kashef-Haghighi; Ziming Weng; Raheleh Salari; Robert T Sweeney; Alayne L Brunner; Shirley X Zhu; Xiangqian Guo; Sushama Varma; Megan L Troxell; Robert B West; Serafim Batzoglou; Arend Sidow
Journal: Genome Res Date: 2013-04-08 Impact factor: 9.043

10. Mutational heterogeneity in cancer and the search for new cancer-associated genes.

Authors: Michael S Lawrence; Petar Stojanov; Paz Polak; Gregory V Kryukov; Kristian Cibulskis; Andrey Sivachenko; Scott L Carter; Chip Stewart; Craig H Mermel; Steven A Roberts; Adam Kiezun; Peter S Hammerman; Aaron McKenna; Yotam Drier; Lihua Zou; Alex H Ramos; Trevor J Pugh; Nicolas Stransky; Elena Helman; Jaegil Kim; Carrie Sougnez; Lauren Ambrogio; Elizabeth Nickerson; Erica Shefler; Maria L Cortés; Daniel Auclair; Gordon Saksena; Douglas Voet; Michael Noble; Daniel DiCara; Pei Lin; Lee Lichtenstein; David I Heiman; Timothy Fennell; Marcin Imielinski; Bryan Hernandez; Eran Hodis; Sylvan Baca; Austin M Dulak; Jens Lohr; Dan-Avi Landau; Catherine J Wu; Jorge Melendez-Zajgla; Alfredo Hidalgo-Miranda; Amnon Koren; Steven A McCarroll; Jaume Mora; Brian Crompton; Robert Onofrio; Melissa Parkin; Wendy Winckler; Kristin Ardlie; Stacey B Gabriel; Charles W M Roberts; Jaclyn A Biegel; Kimberly Stegmaier; Adam J Bass; Levi A Garraway; Matthew Meyerson; Todd R Golub; Dmitry A Gordenin; Shamil Sunyaev; Eric S Lander; Gad Getz
Journal: Nature Date: 2013-06-16 Impact factor: 49.962

26 in total

Review 1. Molecular and cellular bases of adaptation to a changing environment in microorganisms.

Authors: Clara Bleuven; Christian R Landry
Journal: Proc Biol Sci Date: 2016-10-26 Impact factor: 5.349

2. Evolution and cancer medicine - transformative insights.

Authors: Erik Sahai; Charles Swanton
Journal: Nat Rev Clin Oncol Date: 2017-08-22 Impact factor: 66.675

Review 3. Molecular genetics of osteosarcoma.

Authors: Kirby Rickel; Fang Fang; Jianning Tao
Journal: Bone Date: 2016-10-17 Impact factor: 4.398

Review 4. Tumor evolution: Linear, branching, neutral or punctuated?

Authors: Alexander Davis; Ruli Gao; Nicholas Navin
Journal: Biochim Biophys Acta Rev Cancer Date: 2017-01-19 Impact factor: 10.680

5. Stemness and clinical features in relation to the subventricular zone in diffuse lower-grade glioma: an exploratory study.

Authors: Alba Corell; Tomás Gómez Vecchio; Sandra Ferreyra Vega; Anna Dénes; Alice Neimantaite; Alexander Hagerius; Hanna Barchéus; Ole Solheim; Cecilia Lindskog; Thomas Olsson Bontell; Helena Carén; Asgeir S Jakola; Anja Smits
Journal: Neurooncol Adv Date: 2022-06-04

9. Multidisciplinary insight into clonal expansion of HTLV-1-infected cells in adult T-cell leukemia via modeling by deterministic finite automata coupled with high-throughput sequencing.

Authors: Amir Farmanbar; Sanaz Firouzi; Sung-Joon Park; Kenta Nakai; Kaoru Uchimaru; Toshiki Watanabe
Journal: BMC Med Genomics Date: 2017-01-31 Impact factor: 3.063

10. Cancer Molecular Evolution.

Authors: David Posada
Journal: J Mol Evol Date: 2015-08-20 Impact factor: 2.395