Literature DB >> 25733069

Lights, camera, action: high-throughput plant phenotyping is ready for a close-up.

Noah Fahlgren1, Malia A Gehan2, Ivan Baxter3.   

Abstract

Anticipated population growth, shifting demographics, and environmental variability over the next century are expected to threaten global food security. In the face of these challenges, crop yield for food and fuel must be maintained and improved using fewer input resources. In recent years, genetic tools for profiling crop germplasm has benefited from rapid advances in DNA sequencing, and now similar advances are needed to improve the throughput of plant phenotyping. We highlight recent developments in high-throughput plant phenotyping using robotic-assisted imaging platforms and computer vision-assisted analysis tools.
Copyright © 2015 The Authors. Published by Elsevier Ltd.. All rights reserved.

Mesh:

Year:  2015        PMID: 25733069     DOI: 10.1016/j.pbi.2015.02.006

Source DB:  PubMed          Journal:  Curr Opin Plant Biol        ISSN: 1369-5266            Impact factor:   7.834


  148 in total

1.  MVApp-Multivariate Analysis Application for Streamlined Data Analysis and Curation.

Authors:  Magdalena M Julkowska; Stephanie Saade; Gaurav Agarwal; Ge Gao; Yveline Pailles; Mitchell Morton; Mariam Awlia; Mark Tester
Journal:  Plant Physiol       Date:  2019-05-06       Impact factor: 8.340

2.  Using the right tool for the job: the difference between unsupervised and supervised analyses of multivariate ecological data.

Authors:  Eric R Scott; Elizabeth E Crone
Journal:  Oecologia       Date:  2021-02-12       Impact factor: 3.225

Review 3.  Plant synthetic biology for molecular engineering of signalling and development.

Authors:  Jennifer L Nemhauser; Keiko U Torii
Journal:  Nat Plants       Date:  2016-03-02       Impact factor: 15.793

4.  Genomic prediction unifies animal and plant breeding programs to form platforms for biological discovery.

Authors:  John M Hickey; Tinashe Chiurugwi; Ian Mackay; Wayne Powell
Journal:  Nat Genet       Date:  2017-08-30       Impact factor: 38.330

5.  The Next Generation of Training for Arabidopsis Researchers: Bioinformatics and Quantitative Biology.

Authors:  Joanna Friesner; Sarah M Assmann; Ruth Bastow; Julia Bailey-Serres; Jim Beynon; Volker Brendel; C Robin Buell; Alexander Bucksch; Wolfgang Busch; Taku Demura; Jose R Dinneny; Colleen J Doherty; Andrea L Eveland; Pascal Falter-Braun; Malia A Gehan; Michael Gonzales; Erich Grotewold; Rodrigo Gutierrez; Ute Kramer; Gabriel Krouk; Shisong Ma; R J Cody Markelz; Molly Megraw; Blake C Meyers; James A H Murray; Nicholas J Provart; Sue Rhee; Roger Smith; Edgar P Spalding; Crispin Taylor; Tracy K Teal; Keiko U Torii; Chris Town; Matthew Vaughn; Richard Vierstra; Doreen Ware; Olivia Wilkins; Cranos Williams; Siobhan M Brady
Journal:  Plant Physiol       Date:  2017-12       Impact factor: 8.340

6.  Reduced Arogenate Dehydratase Expression: Ramifications for Photosynthesis and Metabolism.

Authors:  Ricarda Höhner; Joaquim V Marques; Tetsuro Ito; Yoshiaki Amakura; Alan D Budgeon; Karl Weitz; Kim K Hixson; Laurence B Davin; Helmut Kirchhoff; Norman G Lewis
Journal:  Plant Physiol       Date:  2018-03-09       Impact factor: 8.340

7.  A New Phenotyping Pipeline Reveals Three Types of Lateral Roots and a Random Branching Pattern in Two Cereals.

Authors:  Sixtine Passot; Beatriz Moreno-Ortega; Daniel Moukouanga; Crispulo Balsera; Soazig Guyomarc'h; Mikael Lucas; Guillaume Lobet; Laurent Laplaze; Bertrand Muller; Yann Guédon
Journal:  Plant Physiol       Date:  2018-05-11       Impact factor: 8.340

8.  3D Sorghum Reconstructions from Depth Images Identify QTL Regulating Shoot Architecture.

Authors:  Ryan F McCormick; Sandra K Truong; John E Mullet
Journal:  Plant Physiol       Date:  2016-08-15       Impact factor: 8.340

9.  Quantitative, Image-Based Phenotyping Methods Provide Insight into Spatial and Temporal Dimensions of Plant Disease.

Authors:  Andrew M Mutka; Sarah J Fentress; Joel W Sher; Jeffrey C Berry; Chelsea Pretz; Dmitri A Nusinow; Rebecca Bart
Journal:  Plant Physiol       Date:  2016-07-21       Impact factor: 8.340

Review 10.  Identification and Characterization of Contrasting Genotypes/Cultivars for Developing Heat Tolerance in Agricultural Crops: Current Status and Prospects.

Authors:  Shikha Chaudhary; Poonam Devi; Anjali Bhardwaj; Uday Chand Jha; Kamal Dev Sharma; P V Vara Prasad; Kadambot H M Siddique; H Bindumadhava; Shiv Kumar; Harsh Nayyar
Journal:  Front Plant Sci       Date:  2020-10-22       Impact factor: 5.753

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