Literature DB >> 25728062

Response of Corynebacterium glutamicum exposed to oscillating cultivation conditions in a two- and a novel three-compartment scale-down bioreactor.

Anja Lemoine1, Nina Maya Martίnez-Iturralde, Robert Spann, Peter Neubauer, Stefan Junne.   

Abstract

The oscillatory conditions in substrate and oxygen supply that typically occur on a large (industrial) scale are usually simulated in two-compartment scale-down reactors. In this study, the performance of nutrient-limited fed-batch cultivations of Corynebacterium glutamicum in a standard two-compartment reactor (two-CR) is compared to the performance in a novel three-compartment reactor (three-CR). The three-CR is designed to mimic three distinct zones of an industrial scale bioreactor that occur if the feed addition is installed at the bottom of the fluid phase. Our findings show that lactate and succinate appear in concentrations two-fold higher in the three-CR cultivation than in the two-CR cultivation. Similar results are revealed for the amino acids glycine, threonine, glutamate, and glutamine. In contrast to the two-CR cultivation, no intracellular accumulation of pyruvate is observed in the three-CR cultivation, since the carbon fluxes are directed toward lactate. As previously reported, the expression of lactate dehydrogenase (LDH) is increased in the context of oxygen deprivation. Thus, C. glutamicum adapts to the oscillating environment in the three-CR. This successful adaptation is revealed by a flow cytometric analysis of BOX-stained cells and a series of electrooptical at line measurements of cell polarisability. Both methods indicate a higher polarisability of cells in the three-CR cultivation. PI-staining does not indicate any membrane damage or accelerated cell death in either system. However, although the strain shows robustness, the product yield of lysine is reduced in scale-down cultivations as compared to cultivations at homogeneous conditions, which underlines the relevance of process optimization.
© 2015 Wiley Periodicals, Inc.

Entities:  

Keywords:  Corynebacterium; compartment reactor; heterogeneity; lysine; oscillation; scale-down

Mesh:

Substances:

Year:  2015        PMID: 25728062     DOI: 10.1002/bit.25543

Source DB:  PubMed          Journal:  Biotechnol Bioeng        ISSN: 0006-3592            Impact factor:   4.530


  14 in total

1.  Potential of Integrating Model-Based Design of Experiments Approaches and Process Analytical Technologies for Bioprocess Scale-Down.

Authors:  Peter Neubauer; Emmanuel Anane; Stefan Junne; Mariano Nicolas Cruz Bournazou
Journal:  Adv Biochem Eng Biotechnol       Date:  2021       Impact factor: 2.635

2.  Control of parallelized bioreactors I: dynamic scheduling software for efficient bioprocess management in high-throughput systems.

Authors:  Lukas Bromig; Nikolas von den Eichen; Dirk Weuster-Botz
Journal:  Bioprocess Biosyst Eng       Date:  2022-10-18       Impact factor: 3.434

3.  Scale-up bioprocess development for production of the antibiotic valinomycin in Escherichia coli based on consistent fed-batch cultivations.

Authors:  Jian Li; Jennifer Jaitzig; Ping Lu; Roderich D Süssmuth; Peter Neubauer
Journal:  Microb Cell Fact       Date:  2015-06-12       Impact factor: 5.328

4.  Euler-Lagrange computational fluid dynamics for (bio)reactor scale down: An analysis of organism lifelines.

Authors:  Cees Haringa; Wenjun Tang; Amit T Deshmukh; Jianye Xia; Matthias Reuss; Joseph J Heijnen; Robert F Mudde; Henk J Noorman
Journal:  Eng Life Sci       Date:  2016-09-14       Impact factor: 2.678

5.  Bioprocess scale-up/down as integrative enabling technology: from fluid mechanics to systems biology and beyond.

Authors:  Frank Delvigne; Ralf Takors; Rob Mudde; Walter van Gulik; Henk Noorman
Journal:  Microb Biotechnol       Date:  2017-08-14       Impact factor: 5.813

6.  Transcriptional response of Escherichia coli to ammonia and glucose fluctuations.

Authors:  Joana Danica Simen; Michael Löffler; Günter Jäger; Karin Schäferhoff; Andreas Freund; Jakob Matthes; Jan Müller; Ralf Takors
Journal:  Microb Biotechnol       Date:  2017-04-26       Impact factor: 5.813

7.  Discharging tRNAs: a tug of war between translation and detoxification in Escherichia coli.

Authors:  Irem Avcilar-Kucukgoze; Alexander Bartholomäus; Juan A Cordero Varela; Robert Franz-Xaver Kaml; Peter Neubauer; Nediljko Budisa; Zoya Ignatova
Journal:  Nucleic Acids Res       Date:  2016-08-09       Impact factor: 16.971

8.  Comparative performance of different scale-down simulators of substrate gradients in Penicillium chrysogenum cultures: the need of a biological systems response analysis.

Authors:  Guan Wang; Junfei Zhao; Cees Haringa; Wenjun Tang; Jianye Xia; Ju Chu; Yingping Zhuang; Siliang Zhang; Amit T Deshmukh; Walter van Gulik; Joseph J Heijnen; Henk J Noorman
Journal:  Microb Biotechnol       Date:  2018-01-15       Impact factor: 5.813

9.  Deciphering the Adaptation of Corynebacterium glutamicum in Transition from Aerobiosis via Microaerobiosis to Anaerobiosis.

Authors:  Julian Lange; Eugenia Münch; Jan Müller; Tobias Busche; Jörn Kalinowski; Ralf Takors; Bastian Blombach
Journal:  Genes (Basel)       Date:  2018-06-13       Impact factor: 4.096

Review 10.  In Silico Prediction of Large-Scale Microbial Production Performance: Constraints for Getting Proper Data-Driven Models.

Authors:  Julia Zieringer; Ralf Takors
Journal:  Comput Struct Biotechnol J       Date:  2018-07-06       Impact factor: 7.271

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