Literature DB >> 25717405

Facilitating post-surgical complication detection through sublanguage analysis.

Hongfang Liu1, Sunghwan Sohn1, Sean Murphy1, Jenna Lovely2, Matthew Burton3, James Naessens1, David W Larson2.   

Abstract

Identification of postsurgical complications is the first step towards improving patient safety and health care quality as well as reducing heath care cost. Existing NLP-based approaches for retrieving postsurgical complications are based on search strategies. Here, we conduct a sublanguage analysis study using free text reports available for a cohort of patients with postsurgical complications identified manually to compare the keywords identified by subject matter experts with words/phrases automatically identified by sublanguage analysis. The results suggest that search-based approaches may miss some cases and the sublanguage analysis results can be used as a base to develop an information extraction system or support search-based NLP approaches by augmenting search queries.

Entities:  

Year:  2014        PMID: 25717405      PMCID: PMC4333707     

Source DB:  PubMed          Journal:  AMIA Jt Summits Transl Sci Proc


  10 in total

1.  A broad-coverage natural language processing system.

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Journal:  Proc AMIA Symp       Date:  2000

2.  Adverse outcomes in surgery: redefinition of postoperative complications.

Authors:  Donald E Fry; Michael Pine; Barbara L Jones; Roger J Meimban
Journal:  Am J Surg       Date:  2009-02-26       Impact factor: 2.565

Review 3.  Blueprint for a new American College of Surgeons: National Surgical Quality Improvement Program.

Authors:  John D Birkmeyer; David M Shahian; Justin B Dimick; Samuel R G Finlayson; David R Flum; Clifford Y Ko; Bruce Lee Hall
Journal:  J Am Coll Surg       Date:  2008-09-19       Impact factor: 6.113

4.  Using machine learning for concept extraction on clinical documents from multiple data sources.

Authors:  Manabu Torii; Kavishwar Wagholikar; Hongfang Liu
Journal:  J Am Med Inform Assoc       Date:  2011-06-27       Impact factor: 4.497

5.  Towards a semantic lexicon for clinical natural language processing.

Authors:  Hongfang Liu; Stephen T Wu; Dingcheng Li; Siddhartha Jonnalagadda; Sunghwan Sohn; Kavishwar Wagholikar; Peter J Haug; Stanley M Huff; Christopher G Chute
Journal:  AMIA Annu Symp Proc       Date:  2012-11-03

6.  Automated identification of postoperative complications within an electronic medical record using natural language processing.

Authors:  Harvey J Murff; Fern FitzHenry; Michael E Matheny; Nancy Gentry; Kristen L Kotter; Kimberly Crimin; Robert S Dittus; Amy K Rosen; Peter L Elkin; Steven H Brown; Theodore Speroff
Journal:  JAMA       Date:  2011-08-24       Impact factor: 56.272

7.  Derivation and validation of automated electronic search strategies to identify pertinent risk factors for postoperative acute lung injury.

Authors:  Anas Alsara; David O Warner; Guangxi Li; Vitaly Herasevich; Ognjen Gajic; Daryl J Kor
Journal:  Mayo Clin Proc       Date:  2011-05       Impact factor: 7.616

8.  Validity of selected AHRQ patient safety indicators based on VA National Surgical Quality Improvement Program data.

Authors:  Patrick S Romano; Hillary J Mull; Peter E Rivard; Shibei Zhao; William G Henderson; Susan Loveland; Dennis Tsilimingras; Cindy L Christiansen; Amy K Rosen
Journal:  Health Serv Res       Date:  2008-09-17       Impact factor: 3.402

9.  Exploring the frontier of electronic health record surveillance: the case of postoperative complications.

Authors:  Fern FitzHenry; Harvey J Murff; Michael E Matheny; Nancy Gentry; Elliot M Fielstein; Steven H Brown; Ruth M Reeves; Dominik Aronsky; Peter L Elkin; Vincent P Messina; Theodore Speroff
Journal:  Med Care       Date:  2013-06       Impact factor: 2.983

10.  An information extraction framework for cohort identification using electronic health records.

Authors:  Hongfang Liu; Suzette J Bielinski; Sunghwan Sohn; Sean Murphy; Kavishwar B Wagholikar; Siddhartha R Jonnalagadda; K E Ravikumar; Stephen T Wu; Iftikhar J Kullo; Christopher G Chute
Journal:  AMIA Jt Summits Transl Sci Proc       Date:  2013-03-18
  10 in total
  4 in total

1.  Detection of clinically important colorectal surgical site infection using Bayesian network.

Authors:  Sunghwan Sohn; David W Larson; Elizabeth B Habermann; James M Naessens; Jasim Y Alabbad; Hongfang Liu
Journal:  J Surg Res       Date:  2016-10-05       Impact factor: 2.192

2.  Detection of Surgical Site Infection Utilizing Automated Feature Generation in Clinical Notes.

Authors:  Feichen Shen; David W Larson; James M Naessens; Elizabeth B Habermann; Hongfang Liu; Sunghwan Sohn
Journal:  J Healthc Inform Res       Date:  2018-11-06

3.  Applying Machine Learning Across Sites: External Validation of a Surgical Site Infection Detection Algorithm.

Authors:  Ying Zhu; Gyorgy J Simon; Elizabeth C Wick; Yumiko Abe-Jones; Nader Najafi; Adam Sheka; Roshan Tourani; Steven J Skube; Zhen Hu; Genevieve B Melton
Journal:  J Am Coll Surg       Date:  2021-04-05       Impact factor: 6.532

4.  Predicate Oriented Pattern Analysis for Biomedical Knowledge Discovery.

Authors:  Feichen Shen; Hongfang Liu; Sunghwan Sohn; David W Larson; Yugyung Lee
Journal:  Intell Inf Manag       Date:  2016-05
  4 in total

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