Literature DB >> 25716456

Extended halogen bonding between fully fluorinated aromatic molecules.

Shigeki Kawai1,2, Ali Sadeghi1,3, Feng Xu4, Lifen Peng4, Akihiro Orita4, Junzo Otera4, Stefan Goedecker1, Ernst Meyer1.   

Abstract

Halogen bonding is a noncovalent interaction where an electrophilic cap on a halogen atom, the so-called σ-hole, attracts a nucleophilic site on an adjacent molecule. The polarizability of halogens relates to the strength of the σ-hole, and accordingly the halogen-halogen distance becomes shorter in the order of Cl, Br, and I. Fully fluoro-substituted aromatic molecules, on the contrary, are generally believed not to form halogen bonds due to the absence of a σ-hole. Here, we study atomic-scale in-plane F-F contacts with high-resolution force microscopy. Our ab initio calculations show that the attractive dispersion forces can overcome the electrostatic repulsion between the fluorine atoms, while the anisotropic distribution of the negative electrostatic potential leads the directional bond and even changes the gap. The coexistence of these two competing forces results in the formation of a "windmill" structure, containing three C-F···F bonds among neighboring molecules. While the σ-hole is absent, the scheme of the C-F···F bonding has a high similarity to halogen bonding.

Entities:  

Keywords:  F−F contact; atomic force microscopy; chemical structure; halogen bonding; intermolecular interaction

Year:  2015        PMID: 25716456     DOI: 10.1021/nn505876n

Source DB:  PubMed          Journal:  ACS Nano        ISSN: 1936-0851            Impact factor:   15.881


  18 in total

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Journal:  Nat Chem       Date:  2016-05-02       Impact factor: 24.427

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Journal:  Nat Commun       Date:  2016-05-27       Impact factor: 14.919

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9.  Efficiency improvement in the cantilever photothermal excitation method using a photothermal conversion layer.

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10.  Precise engineering of quantum dot array coupling through their barrier widths.

Authors:  Ignacio Piquero-Zulaica; Jorge Lobo-Checa; Ali Sadeghi; Zakaria M Abd El-Fattah; Chikahiko Mitsui; Toshihiro Okamoto; Rémy Pawlak; Tobias Meier; Andrés Arnau; J Enrique Ortega; Jun Takeya; Stefan Goedecker; Ernst Meyer; Shigeki Kawai
Journal:  Nat Commun       Date:  2017-10-05       Impact factor: 14.919

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