Literature DB >> 25701501

Structural and functional features of enzymes of Mycobacterium tuberculosis peptidoglycan biosynthesis as targets for drug development.

Gleiciane Leal Moraes1, Guelber Cardoso Gomes2, Paulo Robson Monteiro de Sousa1, Cláudio Nahum Alves1, Thavendran Govender3, Hendrik G Kruger3, Glenn E M Maguire3, Gyanu Lamichhane4, Jerônimo Lameira5.   

Abstract

Tuberculosis (TB) is the second leading cause of human mortality from infectious diseases worldwide. The WHO reported 1.3 million deaths and 8.6 million new cases of TB in 2012. Mycobacterium tuberculosis (M. tuberculosis), the infectious bacteria that causes TB, is encapsulated by a thick and robust cell wall. The innermost segment of the cell wall is comprised of peptidoglycan, a layer that is required for survival and growth of the pathogen. Enzymes that catalyse biosynthesis of the peptidoglycan are essential and are therefore attractive targets for discovery of novel antibiotics as humans lack similar enzymes making it possible to selectively target bacteria only. In this paper, we have reviewed the structures and functions of enzymes GlmS, GlmM, GlmU, MurA, MurB, MurC, MurD, MurE and MurF from M. tuberculosis that are involved in peptidoglycan biosynthesis. In addition, we report homology modelled 3D structures of those key enzymes from M. tuberculosis of which the structures are still unknown. We demonstrated that natural substrates can be successfully docked into the active sites of the GlmS and GlmU respectively. It is therefore expected that the models and the data provided herein will facilitate translational research to develop new drugs to treat TB.
Copyright © 2015. Published by Elsevier Ltd.

Entities:  

Keywords:  Drug design; Homology modelling; Peptidoglycan; TB

Mesh:

Substances:

Year:  2015        PMID: 25701501      PMCID: PMC4659487          DOI: 10.1016/j.tube.2015.01.006

Source DB:  PubMed          Journal:  Tuberculosis (Edinb)        ISSN: 1472-9792            Impact factor:   3.131


  113 in total

Review 1.  Structural classification of proteins: new superfamilies.

Authors:  A G Murzin
Journal:  Curr Opin Struct Biol       Date:  1996-06       Impact factor: 6.809

2.  Benzylidene rhodanines as novel inhibitors of UDP-N-acetylmuramate/L-alanine ligase.

Authors:  Mui Mui Sim; Siew Bee Ng; Antony David Buss; Sharon Carmelita Crasta; Kah Lin Goh; Sue Kim Lee
Journal:  Bioorg Med Chem Lett       Date:  2002-02-25       Impact factor: 2.823

3.  Determination of the MurD mechanism through crystallographic analysis of enzyme complexes.

Authors:  J A Bertrand; G Auger; L Martin; E Fanchon; D Blanot; D Le Beller; J van Heijenoort; O Dideberg
Journal:  J Mol Biol       Date:  1999-06-11       Impact factor: 5.469

4.  Crystal structure of UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase from Escherichia coli.

Authors:  J A Bertrand; G Auger; E Fanchon; L Martin; D Blanot; J van Heijenoort; O Dideberg
Journal:  EMBO J       Date:  1997-06-16       Impact factor: 11.598

5.  Structure of Escherichia coli UDP-N-acetylmuramoyl:L-alanine ligase (MurC).

Authors:  Taru Deva; Edward N Baker; Christopher J Squire; Clyde A Smith
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2006-11-23

6.  Kinetic mechanism of the Escherichia coli UDPMurNAc-tripeptide D-alanyl-D-alanine-adding enzyme: use of a glutathione S-transferase fusion.

Authors:  M S Anderson; S S Eveland; H R Onishi; D L Pompliano
Journal:  Biochemistry       Date:  1996-12-17       Impact factor: 3.162

7.  Phenyl thiazolyl urea and carbamate derivatives as new inhibitors of bacterial cell-wall biosynthesis.

Authors:  Gerardo D Francisco; Zhong Li; J Donald Albright; Nancy H Eudy; Alan H Katz; Peter J Petersen; Pornpen Labthavikul; Guy Singh; Youjun Yang; Beth A Rasmussen; Yang-I Lin; Tarek S Mansour
Journal:  Bioorg Med Chem Lett       Date:  2004-01-05       Impact factor: 2.823

8.  Essential metabolites of Mycobacterium tuberculosis and their mimics.

Authors:  Gyanu Lamichhane; Joel S Freundlich; Sean Ekins; Niluka Wickramaratne; Scott T Nolan; William R Bishai
Journal:  mBio       Date:  2011-02-01       Impact factor: 7.867

9.  Steady-state kinetic mechanism of Escherichia coli UDP-N-acetylenolpyruvylglucosamine reductase.

Authors:  A M Dhalla; J Yanchunas; H T Ho; P J Falk; J J Villafranca; J G Robertson
Journal:  Biochemistry       Date:  1995-04-25       Impact factor: 3.162

10.  Binding of substrates and modifiers to glucosamine synthetase.

Authors:  P J Winterburn; C F Phelps
Journal:  Biochem J       Date:  1971-02       Impact factor: 3.857

View more
  7 in total

1.  Identification of metabolite extraction method for targeted exploration of antimicrobial resistance associated metabolites of Klebsiella pneumoniae.

Authors:  Ashok Kumar; Sevaram Singh; Sonu Kumar Gupta; Shailesh Kumar; Shrikant Kumar; Rita Singh; Lovnish Thakur; Manoj Kumar; Arti Kapil; Yashwant Kumar; Niraj Kumar
Journal:  Sci Rep       Date:  2022-05-27       Impact factor: 4.996

2.  Depletion of M. tuberculosis GlmU from Infected Murine Lungs Effects the Clearance of the Pathogen.

Authors:  Vijay Soni; Sandeep Upadhayay; Priyanka Suryadevara; Ganesh Samla; Archana Singh; Perumal Yogeeswari; Dharmarajan Sriram; Vinay Kumar Nandicoori
Journal:  PLoS Pathog       Date:  2015-10-21       Impact factor: 6.823

Review 3.  New Insights in to the Intrinsic and Acquired Drug Resistance Mechanisms in Mycobacteria.

Authors:  Mohammad J Nasiri; Mehri Haeili; Mona Ghazi; Hossein Goudarzi; Ali Pormohammad; Abbas A Imani Fooladi; Mohammad M Feizabadi
Journal:  Front Microbiol       Date:  2017-04-25       Impact factor: 5.640

4.  Prioritization of Mur family drug targets against A. baumannii and identification of their homologous proteins through molecular phylogeny, primary sequence, and structural analysis.

Authors:  Gizachew Muluneh Amera; Rameez Jabeer Khan; Rajat Kumar Jha; Amita Pathak; Jayaraman Muthukumaran; Amit Kumar Singh
Journal:  J Genet Eng Biotechnol       Date:  2020-07-28

5.  Bioinformatic Exploration of Metal-Binding Proteome of Zoonotic Pathogen Orientia tsutsugamushi.

Authors:  Dixit Sharma; Ankita Sharma; Birbal Singh; Shailender Kumar Verma
Journal:  Front Genet       Date:  2019-09-24       Impact factor: 4.599

6.  Burkholderia pseudomallei d-alanine-d-alanine ligase; detailed characterisation and assessment of a potential antibiotic drug target.

Authors:  Laura Díaz-Sáez; Leah S Torrie; Stuart P McElroy; David Gray; William N Hunter
Journal:  FEBS J       Date:  2019-07-16       Impact factor: 5.542

7.  Structural and functional determination of homologs of the Mycobacterium tuberculosis N-acetylglucosamine-6-phosphate deacetylase (NagA).

Authors:  Mohd Syed Ahangar; Christopher M Furze; Collette S Guy; Charlotte Cooper; Kathryn S Maskew; Ben Graham; Alexander D Cameron; Elizabeth Fullam
Journal:  J Biol Chem       Date:  2018-05-04       Impact factor: 5.157

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.