Literature DB >> 25699292

A system for optically controlling neural circuits with very high spatial and temporal resolution.

Chethan Pandarinath, Eric T Carlson, Sheila Nirenberg.   

Abstract

Optogenetics offers a powerful new approach for controlling neural circuits. It has a vast array of applications in both basic and clinical science. For basic science, it opens the door to unraveling circuit operations, since one can perturb specific circuit components with high spatial (single cell) and high temporal (millisecond) resolution. For clinical applications, it allows new kinds of selective treatments, because it provides a method to inactivate or activate specific components in a malfunctioning circuit and bring it back into a normal operating range [1-3]. To harness the power of optogenetics, though, one needs stimulating tools that work with the same high spatial and temporal resolution as the molecules themselves, the channelrhodopsins. To date, most stimulating tools require a tradeoff between spatial and temporal precision and are prohibitively expensive to integrate into a stimulating/recording setup in a laboratory or a device in a clinical setting [4, 5]. Here we describe a Digital Light Processing (DLP)-based system capable of extremely high temporal resolution (sub-millisecond), without sacrificing spatial resolution. Furthermore, it is constructed using off-the-shelf components, making it feasible for a broad range of biology and bioengineering labs. Using transgenic mice that express channelrhodopsin-2 (ChR2), we demonstrate the system's capability for stimulating channelrhodopsin-expressing neurons in tissue with single cell and sub-millisecond precision.

Entities:  

Year:  2013        PMID: 25699292      PMCID: PMC4331115          DOI: 10.1109/bibe.2013.6701707

Source DB:  PubMed          Journal:  Proc IEEE Int Symp Bioinformatics Bioeng


  19 in total

1.  Fiber-coupled light-emitting diode for localized photostimulation of neurons expressing channelrhodopsin-2.

Authors:  Luke Campagnola; Hong Wang; Mark J Zylka
Journal:  J Neurosci Methods       Date:  2007-11-26       Impact factor: 2.390

2.  Optobionic vision--a new genetically enhanced light on retinal prosthesis.

Authors:  Patrick Degenaar; Nir Grossman; Muhammad Ali Memon; Juan Burrone; Martin Dawson; Emmanuel Drakakis; Mark Neil; Konstantin Nikolic
Journal:  J Neural Eng       Date:  2009-05-20       Impact factor: 5.379

3.  Multi-site optical excitation using ChR2 and micro-LED array.

Authors:  Nir Grossman; Vincent Poher; Matthew S Grubb; Gordon T Kennedy; Konstantin Nikolic; Brian McGovern; Rolando Berlinguer Palmini; Zheng Gong; Emmanuel M Drakakis; Mark A A Neil; Martin D Dawson; Juan Burrone; Patrick Degenaar
Journal:  J Neural Eng       Date:  2010-01-14       Impact factor: 5.379

4.  Retinal prosthetic strategy with the capacity to restore normal vision.

Authors:  Sheila Nirenberg; Chethan Pandarinath
Journal:  Proc Natl Acad Sci U S A       Date:  2012-08-13       Impact factor: 11.205

5.  Optical interrogation of neural circuits in Caenorhabditis elegans.

Authors:  Zengcai V Guo; Anne C Hart; Sharad Ramanathan
Journal:  Nat Methods       Date:  2009-11-08       Impact factor: 28.547

6.  Light-activated channels targeted to ON bipolar cells restore visual function in retinal degeneration.

Authors:  Pamela S Lagali; David Balya; Gautam B Awatramani; Thomas A Münch; Douglas S Kim; Volker Busskamp; Constance L Cepko; Botond Roska
Journal:  Nat Neurosci       Date:  2008-04-27       Impact factor: 24.884

7.  Channelrhodopsin-2, a directly light-gated cation-selective membrane channel.

Authors:  Georg Nagel; Tanjef Szellas; Wolfram Huhn; Suneel Kateriya; Nona Adeishvili; Peter Berthold; Doris Ollig; Peter Hegemann; Ernst Bamberg
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-13       Impact factor: 11.205

8.  Real-time multimodal optical control of neurons and muscles in freely behaving Caenorhabditis elegans.

Authors:  Jeffrey N Stirman; Matthew M Crane; Steven J Husson; Sebastian Wabnig; Christian Schultheis; Alexander Gottschalk; Hang Lu
Journal:  Nat Methods       Date:  2011-01-16       Impact factor: 28.547

9.  Multiple-color optical activation, silencing, and desynchronization of neural activity, with single-spike temporal resolution.

Authors:  Xue Han; Edward S Boyden
Journal:  PLoS One       Date:  2007-03-21       Impact factor: 3.240

10.  Closed-loop optogenetic control of thalamus as a tool for interrupting seizures after cortical injury.

Authors:  Jeanne T Paz; Thomas J Davidson; Eric S Frechette; Bruno Delord; Isabel Parada; Kathy Peng; Karl Deisseroth; John R Huguenard
Journal:  Nat Neurosci       Date:  2012-11-07       Impact factor: 24.884

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  3 in total

1.  Optogenetic spatial and temporal control of cortical circuits on a columnar scale.

Authors:  Arani Roy; Jason J Osik; Neil J Ritter; Shen Wang; James T Shaw; József Fiser; Stephen D Van Hooser
Journal:  J Neurophysiol       Date:  2015-12-02       Impact factor: 2.714

2.  Fully implantable, battery-free wireless optoelectronic devices for spinal optogenetics.

Authors:  Vijay K Samineni; Jangyeol Yoon; Kaitlyn E Crawford; Yu Ra Jeong; Kajanna C McKenzie; Gunchul Shin; Zhaoqian Xie; Saranya S Sundaram; Yuhang Li; Min Young Yang; Jeonghyun Kim; Di Wu; Yeguang Xue; Xue Feng; Yonggang Huang; Aaron D Mickle; Anthony Banks; Jeong Sook Ha; Judith P Golden; John A Rogers; Robert W Gereau
Journal:  Pain       Date:  2017-11       Impact factor: 7.926

3.  Developing an Outcome Measure With High Luminance for Optogenetics Treatment of Severe Retinal Degenerations and for Gene Therapy of Cone Diseases.

Authors:  Artur V Cideciyan; Alejandro J Roman; Samuel G Jacobson; Boyuan Yan; Michele Pascolini; Jason Charng; Simone Pajaro; Sheila Nirenberg
Journal:  Invest Ophthalmol Vis Sci       Date:  2016-06-01       Impact factor: 4.799

  3 in total

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