Literature DB >> 25693797

DYn-2 Based Identification of Arabidopsis Sulfenomes.

Salma Akter1, Jingjing Huang2, Nandita Bodra3, Barbara De Smet3, Khadija Wahni2, Debbie Rombaut4, Jarne Pauwels5, Kris Gevaert5, Kate Carroll6, Frank Van Breusegem7, Joris Messens8.   

Abstract

Identifying the sulfenylation state of stressed cells is emerging as a strategic approach for the detection of key reactive oxygen species signaling proteins. Here, we optimized an in vivo trapping method for cysteine sulfenic acids in hydrogen peroxide (H2O2) stressed plant cells using a dimedone based DYn-2 probe. We demonstrated that DYn-2 specifically detects sulfenylation events in an H2O2 dose- and time-dependent way. With mass spectrometry, we identified 226 sulfenylated proteins after H2O2 treatment of Arabidopsis cells, residing in the cytoplasm (123); plastid (68); mitochondria (14); nucleus (10); endoplasmic reticulum, Golgi and plasma membrane (7) and peroxisomes (4). Of these, 123 sulfenylated proteins have never been reported before to undergo cysteine oxidative post-translational modifications in plants. All in all, with this DYn-2 approach, we have identified new sulfenylated proteins, and gave a first glance on the locations of the sulfenomes of Arabidopsis thaliana.
© 2015 by The American Society for Biochemistry and Molecular Biology, Inc.

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Year:  2015        PMID: 25693797      PMCID: PMC4424392          DOI: 10.1074/mcp.M114.046896

Source DB:  PubMed          Journal:  Mol Cell Proteomics        ISSN: 1535-9476            Impact factor:   5.911


  58 in total

1.  Target proteins of the cytosolic thioredoxins in Arabidopsis thaliana.

Authors:  Daisuke Yamazaki; Ken Motohashi; Takeshi Kasama; Yukichi Hara; Toru Hisabori
Journal:  Plant Cell Physiol       Date:  2004-01       Impact factor: 4.927

2.  Proteomics investigation of endogenous S-nitrosylation in Arabidopsis.

Authors:  Abasse Fares; Michel Rossignol; Jean-Benoît Peltier
Journal:  Biochem Biophys Res Commun       Date:  2011-11-15       Impact factor: 3.575

3.  An improved toolbox to unravel the plant cellular machinery by tandem affinity purification of Arabidopsis protein complexes.

Authors:  Jelle Van Leene; Dominique Eeckhout; Bernard Cannoot; Nancy De Winne; Geert Persiau; Eveline Van De Slijke; Leen Vercruysse; Maarten Dedecker; Aurine Verkest; Klaas Vandepoele; Lennart Martens; Erwin Witters; Kris Gevaert; Geert De Jaeger
Journal:  Nat Protoc       Date:  2014-12-18       Impact factor: 13.491

4.  A thiol peroxidase is an H2O2 receptor and redox-transducer in gene activation.

Authors:  Agnès Delaunay; Delphine Pflieger; Marie Bénédicte Barrault; Joelle Vinh; Michel B Toledano
Journal:  Cell       Date:  2002-11-15       Impact factor: 41.582

5.  Peroxide-dependent sulfenylation of the EGFR catalytic site enhances kinase activity.

Authors:  Candice E Paulsen; Thu H Truong; Francisco J Garcia; Arne Homann; Vinayak Gupta; Stephen E Leonard; Kate S Carroll
Journal:  Nat Chem Biol       Date:  2011-12-11       Impact factor: 15.040

Review 6.  Chemical 'omics' approaches for understanding protein cysteine oxidation in biology.

Authors:  Stephen E Leonard; Kate S Carroll
Journal:  Curr Opin Chem Biol       Date:  2010-12-03       Impact factor: 8.822

Review 7.  Thiolation and nitrosation of cysteines in biological fluids and cells.

Authors:  P Di Simplicio; F Franconi; S Frosalí; D Di Giuseppe
Journal:  Amino Acids       Date:  2003-08-21       Impact factor: 3.520

8.  A major peroxiredoxin-induced activation of Yap1 transcription factor is mediated by reduction-sensitive disulfide bonds and reveals a low level of transcriptional activation.

Authors:  Tsuyoshi Tachibana; Shoko Okazaki; Asako Murayama; Akira Naganuma; Akio Nomoto; Shusuke Kuge
Journal:  J Biol Chem       Date:  2008-12-22       Impact factor: 5.157

9.  The role of annexin 1 in drought stress in Arabidopsis.

Authors:  Dorota Konopka-Postupolska; Greg Clark; Grazyna Goch; Janusz Debski; Krzysztof Floras; Araceli Cantero; Bartlomiej Fijolek; Stanley Roux; Jacek Hennig
Journal:  Plant Physiol       Date:  2009-05-29       Impact factor: 8.340

10.  Sulfenic acid formation in human serum albumin by hydrogen peroxide and peroxynitrite.

Authors:  Sebastián Carballal; Rafael Radi; Marion C Kirk; Stephen Barnes; Bruce A Freeman; Beatriz Alvarez
Journal:  Biochemistry       Date:  2003-08-26       Impact factor: 3.162

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  22 in total

1.  Proteome-Wide Analysis of Cysteine Reactivity during Effector-Triggered Immunity.

Authors:  Evan W McConnell; Philip Berg; Timothy J Westlake; Katherine M Wilson; George V Popescu; Leslie M Hicks; Sorina C Popescu
Journal:  Plant Physiol       Date:  2018-12-03       Impact factor: 8.340

2.  Self-Incompatibility Triggers Irreversible Oxidative Modification of Proteins in Incompatible Pollen.

Authors:  Tamanna Haque; Deborah J Eaves; Zongcheng Lin; Cleidiane G Zampronio; Helen J Cooper; Maurice Bosch; Nicholas Smirnoff; Vernonica E Franklin-Tong
Journal:  Plant Physiol       Date:  2020-04-22       Impact factor: 8.340

3.  The Immune Redoxome: Effector-Triggered Immunity Switches Cysteine Oxidation Profiles.

Authors:  Amna Mhamdi
Journal:  Plant Physiol       Date:  2019-04       Impact factor: 8.340

Review 4.  The Expanding Landscape of the Thiol Redox Proteome.

Authors:  Jing Yang; Kate S Carroll; Daniel C Liebler
Journal:  Mol Cell Proteomics       Date:  2015-10-30       Impact factor: 5.911

5.  Mining for protein S-sulfenylation in Arabidopsis uncovers redox-sensitive sites.

Authors:  Jingjing Huang; Patrick Willems; Bo Wei; Caiping Tian; Renan B Ferreira; Nandita Bodra; Santiago Agustín Martínez Gache; Khadija Wahni; Keke Liu; Didier Vertommen; Kris Gevaert; Kate S Carroll; Marc Van Montagu; Jing Yang; Frank Van Breusegem; Joris Messens
Journal:  Proc Natl Acad Sci U S A       Date:  2019-10-02       Impact factor: 11.205

Review 6.  Proteome-Wide Analysis of Cysteine S-Sulfenylation Using a Benzothiazine-Based Probe.

Authors:  Ling Fu; Keke Liu; Renan B Ferreira; Kate S Carroll; Jing Yang
Journal:  Curr Protoc Protein Sci       Date:  2018-10-12

7.  Cysteine modifications (oxPTM) and protein sulphenylation-mediated sulfenome expression in plants: evolutionary conserved signaling networks?

Authors:  Soumya Mukherjee
Journal:  Plant Signal Behav       Date:  2020-12-10

8.  Diverse Redoxome Reactivity Profiles of Carbon Nucleophiles.

Authors:  Vinayak Gupta; Jing Yang; Daniel C Liebler; Kate S Carroll
Journal:  J Am Chem Soc       Date:  2017-04-10       Impact factor: 15.419

9.  Reactivity, Selectivity, and Stability in Sulfenic Acid Detection: A Comparative Study of Nucleophilic and Electrophilic Probes.

Authors:  Vinayak Gupta; Hanumantharao Paritala; Kate S Carroll
Journal:  Bioconjug Chem       Date:  2016-05-09       Impact factor: 4.774

Review 10.  European contribution to the study of ROS: A summary of the findings and prospects for the future from the COST action BM1203 (EU-ROS).

Authors:  Javier Egea; Isabel Fabregat; Yves M Frapart; Pietro Ghezzi; Agnes Görlach; Thomas Kietzmann; Kateryna Kubaichuk; Ulla G Knaus; Manuela G Lopez; Gloria Olaso-Gonzalez; Andreas Petry; Rainer Schulz; Jose Vina; Paul Winyard; Kahina Abbas; Opeyemi S Ademowo; Catarina B Afonso; Ioanna Andreadou; Haike Antelmann; Fernando Antunes; Mutay Aslan; Markus M Bachschmid; Rui M Barbosa; Vsevolod Belousov; Carsten Berndt; David Bernlohr; Esther Bertrán; Alberto Bindoli; Serge P Bottari; Paula M Brito; Guia Carrara; Ana I Casas; Afroditi Chatzi; Niki Chondrogianni; Marcus Conrad; Marcus S Cooke; João G Costa; Antonio Cuadrado; Pham My-Chan Dang; Barbara De Smet; Bilge Debelec-Butuner; Irundika H K Dias; Joe Dan Dunn; Amanda J Edson; Mariam El Assar; Jamel El-Benna; Péter Ferdinandy; Ana S Fernandes; Kari E Fladmark; Ulrich Förstermann; Rashid Giniatullin; Zoltán Giricz; Anikó Görbe; Helen Griffiths; Vaclav Hampl; Alina Hanf; Jan Herget; Pablo Hernansanz-Agustín; Melanie Hillion; Jingjing Huang; Serap Ilikay; Pidder Jansen-Dürr; Vincent Jaquet; Jaap A Joles; Balaraman Kalyanaraman; Danylo Kaminskyy; Mahsa Karbaschi; Marina Kleanthous; Lars-Oliver Klotz; Bato Korac; Kemal Sami Korkmaz; Rafal Koziel; Damir Kračun; Karl-Heinz Krause; Vladimír Křen; Thomas Krieg; João Laranjinha; Antigone Lazou; Huige Li; Antonio Martínez-Ruiz; Reiko Matsui; Gethin J McBean; Stuart P Meredith; Joris Messens; Verónica Miguel; Yuliya Mikhed; Irina Milisav; Lidija Milković; Antonio Miranda-Vizuete; Miloš Mojović; María Monsalve; Pierre-Alexis Mouthuy; John Mulvey; Thomas Münzel; Vladimir Muzykantov; Isabel T N Nguyen; Matthias Oelze; Nuno G Oliveira; Carlos M Palmeira; Nikoletta Papaevgeniou; Aleksandra Pavićević; Brandán Pedre; Fabienne Peyrot; Marios Phylactides; Gratiela G Pircalabioru; Andrew R Pitt; Henrik E Poulsen; Ignacio Prieto; Maria Pia Rigobello; Natalia Robledinos-Antón; Leocadio Rodríguez-Mañas; Anabela P Rolo; Francis Rousset; Tatjana Ruskovska; Nuno Saraiva; Shlomo Sasson; Katrin Schröder; Khrystyna Semen; Tamara Seredenina; Anastasia Shakirzyanova; Geoffrey L Smith; Thierry Soldati; Bebiana C Sousa; Corinne M Spickett; Ana Stancic; Marie José Stasia; Holger Steinbrenner; Višnja Stepanić; Sebastian Steven; Kostas Tokatlidis; Erkan Tuncay; Belma Turan; Fulvio Ursini; Jan Vacek; Olga Vajnerova; Kateřina Valentová; Frank Van Breusegem; Lokman Varisli; Elizabeth A Veal; A Suha Yalçın; Olha Yelisyeyeva; Neven Žarković; Martina Zatloukalová; Jacek Zielonka; Rhian M Touyz; Andreas Papapetropoulos; Tilman Grune; Santiago Lamas; Harald H H W Schmidt; Fabio Di Lisa; Andreas Daiber
Journal:  Redox Biol       Date:  2017-05-18       Impact factor: 11.799

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