Literature DB >> 30312022

Proteome-Wide Analysis of Cysteine S-Sulfenylation Using a Benzothiazine-Based Probe.

Ling Fu1, Keke Liu1, Renan B Ferreira2, Kate S Carroll2, Jing Yang1.   

Abstract

Oxidation of a protein cysteinyl thiol (Cys-SH) to S-sulfenic acid (Cys-SOH) by a reactive oxygen species (e.g., hydrogen peroxide), which is termed protein S-sulfenylation, is a reversible post-translational modification that plays a crucial role in redox regulation of protein function in various biological processes. Due to its intrinsically labile nature, protein S-sulfenylation cannot be directly detected or analyzed. Chemoselective probing has been the method of choice for analyzing S-sulfenylated proteins either in vitro or in situ, as it allows stabilization and direct detection of this transient oxidative intermediate. However, it remains challenging to globally pinpoint the specific S-sulfenylated cysteine sites on complex proteomes and to quantify their dynamic changes upon oxidative stress. This unit describes how a benzothiazine-based chemoselective probe called BTD and mass spectrometry based chemoproteomics can be used to globally and site-specifically identify and quantify protein S-sulfenylation.
© 2018 by John Wiley & Sons, Inc. © 2018 John Wiley & Sons, Inc.

Entities:  

Keywords:  S-sulfenylation; chemoproteomics; click chemistry; cysteine; mass spectrometry

Mesh:

Substances:

Year:  2018        PMID: 30312022      PMCID: PMC6342663          DOI: 10.1002/cpps.76

Source DB:  PubMed          Journal:  Curr Protoc Protein Sci        ISSN: 1934-3655


  40 in total

Review 1.  Cysteine-mediated redox signaling: chemistry, biology, and tools for discovery.

Authors:  Candice E Paulsen; Kate S Carroll
Journal:  Chem Rev       Date:  2013-03-20       Impact factor: 60.622

2.  A simple and effective strategy for labeling cysteine sulfenic acid in proteins by utilization of β-ketoesters as cleavable probes.

Authors:  Jiang Qian; Revati Wani; Chananat Klomsiri; Leslie B Poole; Allen W Tsang; Cristina M Furdui
Journal:  Chem Commun (Camb)       Date:  2012-03-20       Impact factor: 6.222

Review 3.  Chemical 'omics' approaches for understanding protein cysteine oxidation in biology.

Authors:  Stephen E Leonard; Kate S Carroll
Journal:  Curr Opin Chem Biol       Date:  2010-12-03       Impact factor: 8.822

4.  DYn-2 Based Identification of Arabidopsis Sulfenomes.

Authors:  Salma Akter; Jingjing Huang; Nandita Bodra; Barbara De Smet; Khadija Wahni; Debbie Rombaut; Jarne Pauwels; Kris Gevaert; Kate Carroll; Frank Van Breusegem; Joris Messens
Journal:  Mol Cell Proteomics       Date:  2015-02-18       Impact factor: 5.911

5.  Chemical dissection of an essential redox switch in yeast.

Authors:  Candice E Paulsen; Kate S Carroll
Journal:  Chem Biol       Date:  2009-02-20

Review 6.  Chemical methods for mapping cysteine oxidation.

Authors:  Lisa J Alcock; Michael V Perkins; Justin M Chalker
Journal:  Chem Soc Rev       Date:  2018-01-02       Impact factor: 54.564

7.  Profiling protein thiol oxidation in tumor cells using sulfenic acid-specific antibodies.

Authors:  Young Ho Seo; Kate S Carroll
Journal:  Proc Natl Acad Sci U S A       Date:  2009-09-10       Impact factor: 11.205

8.  Protein sulfenation as a redox sensor: proteomics studies using a novel biotinylated dimedone analogue.

Authors:  Rebecca L Charles; Ewald Schröder; Georgina May; Paul Free; Piers R J Gaffney; Robin Wait; Shajna Begum; Richard J Heads; Philip Eaton
Journal:  Mol Cell Proteomics       Date:  2007-06-14       Impact factor: 5.911

9.  Site-specific mapping and quantification of protein S-sulphenylation in cells.

Authors:  Jing Yang; Vinayak Gupta; Kate S Carroll; Daniel C Liebler
Journal:  Nat Commun       Date:  2014-09-01       Impact factor: 14.919

10.  Mitochondrial ROS regulate thermogenic energy expenditure and sulfenylation of UCP1.

Authors:  Edward T Chouchani; Lawrence Kazak; Mark P Jedrychowski; Gina Z Lu; Brian K Erickson; John Szpyt; Kerry A Pierce; Dina Laznik-Bogoslavski; Ramalingam Vetrivelan; Clary B Clish; Alan J Robinson; Steve P Gygi; Bruce M Spiegelman
Journal:  Nature       Date:  2016-03-30       Impact factor: 49.962

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  19 in total

1.  Isotopic tagging of oxidized and reduced cysteines (iTORC) for detecting and quantifying sulfenic acids, disulfides, and free thiols in cells.

Authors:  Matthew E Albertolle; Sarah M Glass; Elijah Trefts; F Peter Guengerich
Journal:  J Biol Chem       Date:  2019-03-08       Impact factor: 5.157

2.  Mining for protein S-sulfenylation in Arabidopsis uncovers redox-sensitive sites.

Authors:  Jingjing Huang; Patrick Willems; Bo Wei; Caiping Tian; Renan B Ferreira; Nandita Bodra; Santiago Agustín Martínez Gache; Khadija Wahni; Keke Liu; Didier Vertommen; Kris Gevaert; Kate S Carroll; Marc Van Montagu; Jing Yang; Frank Van Breusegem; Joris Messens
Journal:  Proc Natl Acad Sci U S A       Date:  2019-10-02       Impact factor: 11.205

3.  Introduction to approaches and tools for the evaluation of protein cysteine oxidation.

Authors:  Leslie B Poole; Cristina M Furdui; S Bruce King
Journal:  Essays Biochem       Date:  2020-02-17       Impact factor: 8.000

4.  Cysteine modifications (oxPTM) and protein sulphenylation-mediated sulfenome expression in plants: evolutionary conserved signaling networks?

Authors:  Soumya Mukherjee
Journal:  Plant Signal Behav       Date:  2020-12-10

5.  A modification-centric assessment tool for the performance of chemoproteomic probes.

Authors:  Ji-Xiang He; Zheng-Cong Fei; Ling Fu; Cai-Ping Tian; Fu-Chu He; Hao Chi; Jing Yang
Journal:  Nat Chem Biol       Date:  2022-07-21       Impact factor: 16.174

6.  A quantitative thiol reactivity profiling platform to analyze redox and electrophile reactive cysteine proteomes.

Authors:  Ling Fu; Zongmin Li; Keke Liu; Caiping Tian; Jixiang He; Jingyang He; Fuchu He; Ping Xu; Jing Yang
Journal:  Nat Protoc       Date:  2020-07-20       Impact factor: 13.491

7.  Activity-Based Sensing for Site-Specific Proteomic Analysis of Cysteine Oxidation.

Authors:  Yunlong Shi; Kate S Carroll
Journal:  Acc Chem Res       Date:  2019-12-23       Impact factor: 22.384

8.  Global profiling of distinct cysteine redox forms reveals wide-ranging redox regulation in C. elegans.

Authors:  Jin Meng; Ling Fu; Keke Liu; Caiping Tian; Ziyun Wu; Youngeun Jung; Renan B Ferreira; Kate S Carroll; T Keith Blackwell; Jing Yang
Journal:  Nat Commun       Date:  2021-03-03       Impact factor: 14.919

Review 9.  Contemporary proteomic strategies for cysteine redoxome profiling.

Authors:  Patrick Willems; Frank Van Breusegem; Jingjing Huang
Journal:  Plant Physiol       Date:  2021-05-27       Impact factor: 8.340

Review 10.  The Role of Protein Persulfidation in Brain Aging and Neurodegeneration.

Authors:  Dunja Petrovic; Emilia Kouroussis; Thibaut Vignane; Milos R Filipovic
Journal:  Front Aging Neurosci       Date:  2021-06-23       Impact factor: 5.750

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