| Literature DB >> 25685009 |
Ernieenor Faraliana Che Lah1, Salmah Yaakop2, Mariana Ahamad3, Shukor Md Nor2.
Abstract
Blood meal analysis (BMA) from ticks allows for the identification of natural hosts of ticks (Acari: Ixodidae). The aim of this study is to identify the blood meal sources of field collected on-host ticks using PCR analysis. DNA of four genera of ticks was isolated and their cytochrome b (Cyt b) gene was amplified to identify host blood meals. A phylogenetic tree was constructed based on data of Cyt b sequences using Neighbor Joining (NJ) and Maximum Parsimony (MP) analysis using MEGA 5.05 for the clustering of hosts of tick species. Twenty out of 27 samples showed maximum similarity (99%) with GenBank sequences through a Basic Local Alignment Search Tool (BLAST) while 7 samples only showed a similarity range of between 91-98%. The phylogenetic trees showed that the blood meal samples were derived from small rodents (Leopoldamyssabanus, Rattustiomanicus and Sundamysmuelleri), shrews (Tupaiaglis) and mammals (Tapirusindicus and Prionailurusbengalensis), supported by 82-88% bootstrap values. In this study, Cyt b gene as a molecular target produced reliable results and was very significant for the effective identification of ticks' blood meal. The assay can be used as a tool for identifying unknown blood meals of field collected on-host ticks.Entities:
Keywords: Blood meal; Cytochrome b; Ticks; Vector control; hosts
Year: 2015 PMID: 25685009 PMCID: PMC4319051 DOI: 10.3897/zookeys.478.8037
Source DB: PubMed Journal: Zookeys ISSN: 1313-2970 Impact factor: 1.546
Figure 1.Map of the study sites in Peninsular Malaysia: 1 Hulu Langat, Selangor 2 Labu, Negeri Sembilan 3 Janda Baik, Pahang 4 Gunung Tebu, Terengganu.
List of primers used for PCR amplification
| Gene | Primer name | Sequences (5’–3’) |
|---|---|---|
| Cyt | UNFOR403 | 5'-TGA GGA CAA ATA TCA TTC TGA GG-3' |
| UNREV1025 | 5'-GGT TGT CCT CCA ATT CAT GTT A-3' |
Details of ticks samples used in analysis.
| K1a | Krau Wildlife Reserved, Pahang | Pristine tropical rainforest | |
| K2a | Krau Wildlife Reserved, Pahang | Pristine tropical rainforest | |
| K3c | Krau Wildlife Reserved, Pahang | Pristine tropical rainforest | |
| K4b | Krau Wildlife Reserved, Pahang | Pristine tropical rainforest | |
| K5b | Krau Wildlife Reserved, Pahang | Pristine tropical rainforest | |
| SBN 01 | Labu, Negeri Sembilan | Scrubs | |
| SBN12_1 | Labu, Negeri Sembilan | Scrubs | |
| SBN23_1 | Labu, Negeri Sembilan | Scrubs | |
| SBN 14 | Labu, Negeri Sembilan | Scrubs | |
| JBB01_1 | Janda Baik, Pahang | Riverine vegetation | |
| JBB03_1 | Janda Baik, Pahang | Riverine vegetation | |
| JBB03_2 | Janda Baik, Pahang | Riverine vegetation | |
| JBB03_3 | Janda Baik, Pahang | Riverine vegetation | |
| JBB03_4 | Janda Baik, Pahang | Riverine vegetation | |
| HL01 | Hulu Langat, Selangor | Pristine tropical rainforest | |
| HL02 | Hulu Langat, Selangor | Pristine tropical rainforest | |
| HL03_2 | Hulu Langat, Selangor | Pristine tropical rainforest | |
| HL03 | Hulu Langat, Selangor | Pristine tropical rainforest | |
| HL04_15 | Hulu Langat, Selangor | Pristine tropical rainforest | |
| HL02_4 | Hulu Langat, Selangor | Pristine tropical rainforest | |
| HL02_5 | Hulu Langat, Selangor | Pristine tropical rainforest | |
| HL02_3 | Hulu Langat, Selangor | Pristine tropical rainforest | |
| HL07 | Hulu Langat, Selangor | Pristine tropical rainforest | |
| HL02_1 | Hulu Langat, Selangor | Pristine tropical rainforest | |
| GT23_2 | Gunung Tebu, Terengganu | Secondary growth | |
| GT23_3 | Gunung Tebu, Terengganu | Secondary growth | |
| GT23_5 | Gunung Tebu, Terengganu | Secondary growth |
Figure 2.Amplification of Cyt b gene produced 623 bp of PCR products from ticks species. Lane 1: unfed ticks (negative control); Lane 2: vertebrate DNA (positive control); Lanes 3–8: DNA of field-collected ticks ( sp., sp., sp., , sp., sp.,) and M1, M2: 100 bp DNA ladder (Bioron, Germany).
Blasting results against available sequences in GenBank.
| % | |||
| K1a | 99 ( | ||
| K2a | 99 ( | ||
| K3c | 99 ( | ||
| K4b | 99 ( | ||
| K5b | 99 ( | ||
| SBN 01 | 99 ( | ||
| SBN12_1 | 99 ( | ||
| SBN23_1 | 98 ( | ||
| SBN 14 | 99 ( | ||
| JBB01_1 | 99 ( | ||
| JBB03_1 | 91 ( | ||
| JBB03_2 | 91 ( | ||
| JBB03_3 | 91 ( | ||
| JBB03_4 | 91 ( | ||
| HL01 | 99 ( | ||
| HL02 | 99 ( | ||
| HL03_2 | 99 ( | ||
| HL03 | 97 ( | ||
| HL04_15 | 98 ( | ||
| HL02_4 | 99 ( | ||
| HL02_5 | 99 ( | ||
| HL02_3 | 99 ( | ||
| HL07 | 99 ( | ||
| HL02_1 | 99 ( | ||
| GT23_2 | 99 ( | ||
| GT23_3 | 99 ( | ||
| GT23_5 | 99 ( |
Figure 3.Neighbor-joining tree constructed from 28 sequences (including one outgroup sequence) of the Cyt b gene. The numbers at the branches stand for bootstrap values 70% and above of 1000 replications. Genera of ticks represented by blue for sp., orange for sp., violet for sp. and green for sp.
Figure 4.Maximum parsimony tree constructed from 28 sequences (including one outgroup sequence) of the Cyt b gene. The numbers at the branches stand for bootstrap values 70% and above of 1000 replications. Genera of ticks represented by blue for sp., orange for sp., violet for sp. and green for sp.