Literature DB >> 25681085

Deep Genotyping of the IDS Gene in Colombian Patients with Hunter Syndrome.

Johanna Galvis1, Jannet González, Alfredo Uribe, Harvy Velasco.   

Abstract

BACKGROUND: Mucopolysaccharidosis type II (MPSII), also known as Hunter syndrome, is an X-linked disorder caused by mutations in the iduronate 2 sulfatase (IDS) gene. This enzyme catalyzes the initial step in the catabolism of heparan sulfate and dermatan sulfate; thus, its deficiency leads to the accumulation of these glycosaminoglycans. MPS II has significant allelic heterogeneity, making the establishment of genotype-phenotype correlations difficult. This study assessed clinical features in combination with deep genotyping of a group of Colombian patients with MPS II and attempted to establish a degree of genotype-phenotype correlation by employing bioinformatic tools.
METHODS: Eighteen patients were included in this study, 11% of whom were non-neuronopathic, and the other 89% were neuronopathic. Samples were all analyzed using three molecular methodologies: MLPA, direct exon sequencing, and RFLP analysis.
RESULTS: A total of 13 mutations were identified, 6 of which were novel (c.548_564dup16, c.477insT, c.595_607del12, c. 549_562del13, c.182delC, and a complete deletion of exon 7). The frequency of common mutations (R468Q, Q465X, K347Q, K236N, S71N, R88H, and a conversion phenomenon) was 53.85%. The S71N mutation was frequent among the attenuated phenotype, while private frameshift mutations and rearrangements were seen in patients with severe phenotypes. Molecular docking was performed on the wild-type and mutant IDS proteins, which revealed changes in the enzyme-substrate interaction for the mutant IDS.
CONCLUSION: The frequency of novel mutations (46.15%) is similar to what has been reported elsewhere. The use of bioinformatic tools showed differences in enzyme-substrate interactions. Studies with larger groups of patients are needed.

Entities:  

Year:  2015        PMID: 25681085      PMCID: PMC4501242          DOI: 10.1007/8904_2014_376

Source DB:  PubMed          Journal:  JIMD Rep        ISSN: 2192-8304


  48 in total

1.  Mucopolysaccharidosis type II: identification of 30 novel mutations among Latin American patients.

Authors:  A C Brusius-Facchin; I V D Schwartz; C Zimmer; M G Ribeiro; A X Acosta; D Horovitz; I L Monlleó; M I B Fontes; A Fett-Conte; R P Oliveira Sobrinho; A R Duarte; R Boy; P Mabe; M Ascurra; M de Michelena; K L Tylee; G T N Besley; M C V Garreton; R Giugliani; S Leistner-Segal
Journal:  Mol Genet Metab       Date:  2013-09-01       Impact factor: 4.797

2.  Analysis of a 43.6 kb deletion in a patient with Hunter syndrome (MPSII): identification of a fusion transcript including sequences from the gene W and the IDS gene.

Authors:  K Lagerstedt; B M Carlberg; R Karimi-Nejad; W J Kleijer; M L Bondeson
Journal:  Hum Mutat       Date:  2000       Impact factor: 4.878

3.  Sequence determinants directing conversion of cysteine to formylglycine in eukaryotic sulfatases.

Authors:  T Dierks; M R Lecca; P Schlotterhose; B Schmidt; K von Figura
Journal:  EMBO J       Date:  1999-04-15       Impact factor: 11.598

4.  Hunter syndrome: isolation of an iduronate-2-sulfatase cDNA clone and analysis of patient DNA.

Authors:  P J Wilson; C P Morris; D S Anson; T Occhiodoro; J Bielicki; P R Clements; J J Hopwood
Journal:  Proc Natl Acad Sci U S A       Date:  1990-11       Impact factor: 11.205

5.  Mutation analysis in the iduronate-2-sulphatase gene in 43 Japanese patients with mucopolysaccharidosis type II (Hunter disease).

Authors:  K Isogai; K Sukegawa; S Tomatsu; T Fukao; X Q Song; Y Yamada; S Fukuda; T Orii; N Kondo
Journal:  J Inherit Metab Dis       Date:  1998-02       Impact factor: 4.982

6.  Effect of Hunter disease (mucopolysaccharidosis type II) mutations on molecular phenotypes of iduronate-2-sulfatase: enzymatic activity, protein processing and structural analysis.

Authors:  K Sukegawa-Hayasaka; Z Kato; H Nakamura; S Tomatsu; T Fukao; K Kuwata; T Orii; N Kondo
Journal:  J Inherit Metab Dis       Date:  2006-11-07       Impact factor: 4.982

7.  Evidence for an iduronate-sulfatase pseudogene near the functional Hunter syndrome gene in Xq27.3-q28.

Authors:  M Rathmann; S Bunge; C Steglich; E Schwinger; A Gal
Journal:  Hum Genet       Date:  1995-01       Impact factor: 4.132

8.  Characterization of iduronate-2-sulfatase gene-pseudogene recombinations in eight patients with Mucopolysaccharidosis type II revealed by a rapid PCR-based method.

Authors:  Susanna Lualdi; Stefano Regis; Maja Di Rocco; Fabio Corsolini; Marina Stroppiano; Daniela Antuzzi; Mirella Filocamo
Journal:  Hum Mutat       Date:  2005-05       Impact factor: 4.878

Review 9.  Sulfatases and human disease.

Authors:  Graciana Diez-Roux; Andrea Ballabio
Journal:  Annu Rev Genomics Hum Genet       Date:  2005       Impact factor: 8.929

Review 10.  Mucopolysaccharidosis type II (Hunter syndrome): a clinical review and recommendations for treatment in the era of enzyme replacement therapy.

Authors:  J Edmond Wraith; Maurizio Scarpa; Michael Beck; Olaf A Bodamer; Linda De Meirleir; Nathalie Guffon; Allan Meldgaard Lund; Gunilla Malm; Ans T Van der Ploeg; Jiri Zeman
Journal:  Eur J Pediatr       Date:  2007-11-23       Impact factor: 3.183

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  5 in total

1.  Clinical, biochemical and molecular characteristics of Filipino patients with mucopolysaccharidosis type II - Hunter syndrome.

Authors:  Mary Anne D Chiong; Daffodil M Canson; Mary Ann R Abacan; Melissa Mae P Baluyot; Cynthia P Cordero; Catherine Lynn T Silao
Journal:  Orphanet J Rare Dis       Date:  2017-01-11       Impact factor: 4.123

2.  Determination of genotypic and clinical characteristics of Colombian patients with mucopolysaccharidosis IVA.

Authors:  Sandra M Tapiero-Rodriguez; Johanna C Acosta Guio; Gloria Liliana Porras-Hurtado; Natalia García; Martha Solano; Harry Pachajoa; Harvy M Velasco
Journal:  Appl Clin Genet       Date:  2018-04-24

3.  The mutational spectrum of hunter syndrome reveals correlation between biochemical and clinical profiles in Tunisian patients.

Authors:  L Chkioua; O Grissa; N Leban; M Gribaa; H Boudabous; H Ben Turkia; S Ferchichi; N Tebib; S Laradi
Journal:  BMC Med Genet       Date:  2020-05-24       Impact factor: 2.103

4.  A New Mutation in IDS Gene Causing Hunter Syndrome: A Case Report.

Authors:  Caio Perez Gomes; Maryana Mara Marins; Fabiana Louise Motta; Sandra Obikawa Kyosen; Marco Antonio Curiati; Vânia D'Almeida; Ana Maria Martins; João Bosco Pesquero
Journal:  Front Genet       Date:  2020-03-18       Impact factor: 4.599

Review 5.  Detection of Structural Variants by NGS: Revealing Missing Alleles in Lysosomal Storage Diseases.

Authors:  Valentina La Cognata; Sebastiano Cavallaro
Journal:  Biomedicines       Date:  2022-07-29
  5 in total

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