Literature DB >> 28882898

Switch I-dependent allosteric signaling in a G-protein chaperone-B12 enzyme complex.

Gregory C Campanello1, Michael Lofgren1, Adam L Yokom1,2,3, Daniel R Southworth1,2, Ruma Banerjee4.   

Abstract

G-proteins regulate various processes ranging from DNA replication and protein synthesis to cytoskeletal dynamics and cofactor assimilation and serve as models for uncovering strategies deployed for allosteric signal transduction. MeaB is a multifunctional G-protein chaperone, which gates loading of the active 5'-deoxyadenosylcobalamin cofactor onto methylmalonyl-CoA mutase (MCM) and precludes loading of inactive cofactor forms. MeaB also safeguards MCM, which uses radical chemistry, against inactivation and rescues MCM inactivated during catalytic turnover by using the GTP-binding energy to offload inactive cofactor. The conserved switch I and II signaling motifs used by G-proteins are predicted to mediate allosteric regulation in response to nucleotide binding and hydrolysis in MeaB. Herein, we targeted conserved residues in the MeaB switch I motif to interrogate the function of this loop. Unexpectedly, the switch I mutations had only modest effects on GTP binding and on GTPase activity and did not perturb stability of the MCM-MeaB complex. However, these mutations disrupted multiple MeaB chaperone functions, including cofactor editing, loading, and offloading. Hence, although residues in the switch I motif are not essential for catalysis, they are important for allosteric regulation. Furthermore, single-particle EM analysis revealed, for the first time, the overall architecture of the MCM-MeaB complex, which exhibits a 2:1 stoichiometry. These EM studies also demonstrate that the complex exhibits considerable conformational flexibility. In conclusion, the switch I element does not significantly stabilize the MCM-MeaB complex or influence the affinity of MeaB for GTP but is required for transducing signals between MeaB and MCM.
© 2017 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  GTPase; adenosylcobalamin (AdoCbl); allosteric regulation; electron microscopy (EM); low molecular weight G-protein

Mesh:

Substances:

Year:  2017        PMID: 28882898      PMCID: PMC5663867          DOI: 10.1074/jbc.M117.786095

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  43 in total

Review 1.  The ras protein family: evolutionary tree and role of conserved amino acids.

Authors:  A Valencia; P Chardin; A Wittinghofer; C Sander
Journal:  Biochemistry       Date:  1991-05-14       Impact factor: 3.162

Review 2.  Methylmalonic acidemia (MMA).

Authors:  Pranoot Tanpaiboon
Journal:  Mol Genet Metab       Date:  2005-05       Impact factor: 4.797

3.  Structural insights into HypB, a GTP-binding protein that regulates metal binding.

Authors:  Raphael Gasper; Andrea Scrima; Alfred Wittinghofer
Journal:  J Biol Chem       Date:  2006-06-28       Impact factor: 5.157

4.  Cofactor Editing by the G-protein Metallochaperone Domain Regulates the Radical B12 Enzyme IcmF.

Authors:  Zhu Li; Kenichi Kitanishi; Umar T Twahir; Valentin Cracan; Derrell Chapman; Kurt Warncke; Ruma Banerjee
Journal:  J Biol Chem       Date:  2017-01-27       Impact factor: 5.157

5.  Structural basis unifying diverse GTP hydrolysis mechanisms.

Authors:  Baskaran Anand; Soneya Majumdar; Balaji Prakash
Journal:  Biochemistry       Date:  2013-01-28       Impact factor: 3.162

Review 6.  Navigating the B(12) road: assimilation, delivery, and disorders of cobalamin.

Authors:  Carmen Gherasim; Michael Lofgren; Ruma Banerjee
Journal:  J Biol Chem       Date:  2013-03-28       Impact factor: 5.157

7.  How coenzyme B12 radicals are generated: the crystal structure of methylmalonyl-coenzyme A mutase at 2 A resolution.

Authors:  F Mancia; N H Keep; A Nakagawa; P F Leadlay; S McSweeney; B Rasmussen; P Bösecke; O Diat; P R Evans
Journal:  Structure       Date:  1996-03-15       Impact factor: 5.006

Review 8.  B12 trafficking in mammals: A for coenzyme escort service.

Authors:  Ruma Banerjee
Journal:  ACS Chem Biol       Date:  2006-04-25       Impact factor: 5.100

9.  MeaB is a component of the methylmalonyl-CoA mutase complex required for protection of the enzyme from inactivation.

Authors:  Natalia Korotkova; Mary E Lidstrom
Journal:  J Biol Chem       Date:  2004-01-20       Impact factor: 5.157

10.  The Rap-RapGAP complex: GTP hydrolysis without catalytic glutamine and arginine residues.

Authors:  Andrea Scrima; Christoph Thomas; Delia Deaconescu; Alfred Wittinghofer
Journal:  EMBO J       Date:  2008-02-28       Impact factor: 11.598

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  4 in total

1.  Mechanistic Insights into the Metal-Dependent Activation of ZnII-Dependent Metallochaperones.

Authors:  Matthew R Jordan; Jiefei Wang; Andy Weiss; Eric P Skaar; Daiana A Capdevila; David P Giedroc
Journal:  Inorg Chem       Date:  2019-06-17       Impact factor: 5.165

2.  The human B12 trafficking chaperones: CblA, ATR, CblC and CblD.

Authors:  Zhu Li; Harsha Gouda; Shubhadra Pillay; Madeline Yaw; Markus Ruetz; Ruma Banerjee
Journal:  Methods Enzymol       Date:  2022-02-10       Impact factor: 1.682

3.  Allosteric Regulation of Oligomerization by a B12 Trafficking G-Protein Is Corrupted in Methylmalonic Aciduria.

Authors:  Markus Ruetz; Gregory C Campanello; Liam McDevitt; Adam L Yokom; Pramod K Yadav; David Watkins; David S Rosenblatt; Melanie D Ohi; Daniel R Southworth; Ruma Banerjee
Journal:  Cell Chem Biol       Date:  2019-05-02       Impact factor: 8.116

4.  Redox-Linked Coordination Chemistry Directs Vitamin B12 Trafficking.

Authors:  Ruma Banerjee; Harsha Gouda; Shubhadra Pillay
Journal:  Acc Chem Res       Date:  2021-04-02       Impact factor: 22.384

  4 in total

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