Literature DB >> 25674384

ARID1B-mediated disorders: Mutations and possible mechanisms.

Joe C H Sim1, Susan M White2, Paul J Lockhart2.   

Abstract

Mutations in the gene encoding AT-rich interactive domain-containing protein 1B (ARID1B) were recently associated with multiple syndromes characterized by developmental delay and intellectual disability, in addition to nonsyndromic intellectual disability. While the majority of ARID1B mutations identified to date are predicted to result in haploinsufficiency, the underlying pathogenic mechanisms have yet to be fully understood. ARID1B is a DNA-binding subunit of the Brahma-associated factor chromatin remodelling complexes, which play a key role in the regulation of gene activity. The function of remodelling complexes can be regulated by their subunit composition, and there is some evidence that ARID1B is a component of the neuron-specific chromatin remodelling complex. This complex is involved in the regulation of stem/progenitor cells exiting the cell cycle and differentiating into postmitotic neurons. Recent research has indicated that alterations in the cell cycle contribute to the underlying pathogenesis of syndromes associated with ARID1B haploinsufficiency in fibroblasts derived from affected individuals. This review describes studies linking ARID1B to neurodevelopmental disorders and it summarizes the function of ARID1B to provide insights into the pathogenic mechanisms underlying ARID1B-mediated disorders. In conclusion, ARID1B is likely to play a key role in neurodevelopment and reduced levels of wild-type protein compromise normal brain development. Additional studies are required to determine the mechanisms by which impaired neural development contributes to the intellectual disability and speech impairment that are consistently observed in individuals with ARID1B haploinsufficiency.

Entities:  

Keywords:  ARID1B mutation; Coffin-Siris syndrome; Intellectual disability; cell cycle; chromatin remodelling; haploinsufficiency

Year:  2015        PMID: 25674384      PMCID: PMC4322591          DOI: 10.5582/irdr.2014.01021

Source DB:  PubMed          Journal:  Intractable Rare Dis Res        ISSN: 2186-3644


  40 in total

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Authors:  Sandesh Chakravarthy Sreenath Nagamani; Ayelet Erez; Christine Eng; Zhishuo Ou; Craig Chinault; Laura Workman; James Coldwell; Pawel Stankiewicz; Ankita Patel; James R Lupski; Sau Wai Cheung
Journal:  Eur J Hum Genet       Date:  2008-11-26       Impact factor: 4.246

2.  Dynamics of expression of ARID1A and ARID1B subunits in mouse embryos and in cells during the cell cycle.

Authors:  Angel Flores-Alcantar; Adriana Gonzalez-Sandoval; Diana Escalante-Alcalde; Hilda Lomelí
Journal:  Cell Tissue Res       Date:  2011-06-07       Impact factor: 5.249

Review 3.  SWI/SNF nucleosome remodellers and cancer.

Authors:  Boris G Wilson; Charles W M Roberts
Journal:  Nat Rev Cancer       Date:  2011-06-09       Impact factor: 60.716

Review 4.  Mechanism(s) of SWI/SNF-induced nucleosome mobilization.

Authors:  Ning Liu; Angela Balliano; Jeffrey J Hayes
Journal:  Chembiochem       Date:  2010-10-28       Impact factor: 3.164

5.  Srg3, a mouse homolog of yeast SWI3, is essential for early embryogenesis and involved in brain development.

Authors:  J K Kim; S O Huh; H Choi; K S Lee; D Shin; C Lee; J S Nam; H Kim; H Chung; H W Lee; S D Park; R H Seong
Journal:  Mol Cell Biol       Date:  2001-11       Impact factor: 4.272

6.  Two related ARID family proteins are alternative subunits of human SWI/SNF complexes.

Authors:  Xiaomei Wang; Norman G Nagl; Deborah Wilsker; Michael Van Scoy; Stephen Pacchione; Peter Yaciuk; Peter B Dallas; Elizabeth Moran
Journal:  Biochem J       Date:  2004-10-15       Impact factor: 3.857

7.  The DNA-binding properties of the ARID-containing subunits of yeast and mammalian SWI/SNF complexes.

Authors:  Deborah Wilsker; Antonia Patsialou; Steven D Zumbrun; Suhkmann Kim; Yuan Chen; Peter B Dallas; Elizabeth Moran
Journal:  Nucleic Acids Res       Date:  2004-02-24       Impact factor: 16.971

8.  A comprehensive molecular study on Coffin-Siris and Nicolaides-Baraitser syndromes identifies a broad molecular and clinical spectrum converging on altered chromatin remodeling.

Authors:  Dagmar Wieczorek; Nina Bögershausen; Filippo Beleggia; Sabine Steiner-Haldenstätt; Esther Pohl; Yun Li; Esther Milz; Marcel Martin; Holger Thiele; Janine Altmüller; Yasemin Alanay; Hülya Kayserili; Ludger Klein-Hitpass; Stefan Böhringer; Andreas Wollstein; Beate Albrecht; Koray Boduroglu; Almuth Caliebe; Krystyna Chrzanowska; Ozgur Cogulu; Francesca Cristofoli; Johanna Christina Czeschik; Koenraad Devriendt; Maria Teresa Dotti; Nursel Elcioglu; Blanca Gener; Timm O Goecke; Malgorzata Krajewska-Walasek; Encarnación Guillén-Navarro; Joussef Hayek; Gunnar Houge; Esra Kilic; Pelin Özlem Simsek-Kiper; Vanesa López-González; Alma Kuechler; Stanislas Lyonnet; Francesca Mari; Annabella Marozza; Michèle Mathieu Dramard; Barbara Mikat; Gilles Morin; Fanny Morice-Picard; Ferda Ozkinay; Anita Rauch; Alessandra Renieri; Sigrid Tinschert; G Eda Utine; Catheline Vilain; Rossella Vivarelli; Christiane Zweier; Peter Nürnberg; Sven Rahmann; Joris Vermeesch; Hermann-Josef Lüdecke; Michael Zeschnigk; Bernd Wollnik
Journal:  Hum Mol Genet       Date:  2013-08-01       Impact factor: 6.150

9.  The trithorax group gene osa encodes an ARID-domain protein that genetically interacts with the brahma chromatin-remodeling factor to regulate transcription.

Authors:  M Vázquez; L Moore; J A Kennison
Journal:  Development       Date:  1999-02       Impact factor: 6.868

10.  Expanding the phenotypic spectrum of ARID1B-mediated disorders and identification of altered cell-cycle dynamics due to ARID1B haploinsufficiency.

Authors:  Joe C H Sim; Susan M White; Elizabeth Fitzpatrick; Gabrielle R Wilson; Greta Gillies; Kate Pope; Hayley S Mountford; Pernille M Torring; Shane McKee; Anneke T Vulto-van Silfhout; Shalini N Jhangiani; Donna M Muzny; Richard J Leventer; Martin B Delatycki; David J Amor; Paul J Lockhart
Journal:  Orphanet J Rare Dis       Date:  2014-03-27       Impact factor: 4.123

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  16 in total

Review 1.  Intellectual Disability: When the Hypertrichosis Is a Clue.

Authors:  Lidia Pezzani; Donatella Milani; Gianluca Tadini
Journal:  J Pediatr Genet       Date:  2015-09-28

2.  The GPSM2/LGN GoLoco motifs are essential for hearing.

Authors:  Yoni Bhonker; Amal Abu-Rayyan; Kathy Ushakov; Liat Amir-Zilberstein; Shaked Shivatzki; Ofer Yizhar-Barnea; Tal Elkan-Miller; Einav Tayeb-Fligelman; Sun Myoung Kim; Meytal Landau; Moien Kanaan; Ping Chen; Fumio Matsuzaki; David Sprinzak; Karen B Avraham
Journal:  Mamm Genome       Date:  2015-12-11       Impact factor: 2.957

3.  Lifespan analysis of brain development, gene expression and behavioral phenotypes in the Ts1Cje, Ts65Dn and Dp(16)1/Yey mouse models of Down syndrome.

Authors:  Nadine M Aziz; Faycal Guedj; Jeroen L A Pennings; Jose Luis Olmos-Serrano; Ashley Siegel; Tarik F Haydar; Diana W Bianchi
Journal:  Dis Model Mech       Date:  2018-06-12       Impact factor: 5.758

4.  A Phosphoproteomic Screen Identifies a Guanine Nucleotide Exchange Factor for Rab3A Protein as a Mitogen-activated Protein (MAP) Kinase Phosphatase-5-regulated MAP Kinase Target in Interleukin 6 (IL-6) Secretion and Myogenesis.

Authors:  Hojin Lee; Kisuk Min; Jae-Sung Yi; Hao Shi; Woochul Chang; Leandra Jackson; Anton M Bennett
Journal:  J Biol Chem       Date:  2017-01-17       Impact factor: 5.486

5.  A novel microduplication of ARID1B: Clinical, genetic, and proteomic findings.

Authors:  Catarina M Seabra; Nicholas Szoko; Serkan Erdin; Ashok Ragavendran; Alexei Stortchevoi; Patrícia Maciel; Kathleen Lundberg; Daniela Schlatzer; Janice Smith; Michael E Talkowski; James F Gusella; Marvin R Natowicz
Journal:  Am J Med Genet A       Date:  2017-07-10       Impact factor: 2.578

Review 6.  The Role of Epigenetic Change in Autism Spectrum Disorders.

Authors:  Yuk Jing Loke; Anthony John Hannan; Jeffrey Mark Craig
Journal:  Front Neurol       Date:  2015-05-26       Impact factor: 4.003

7.  ARID1B alterations identify aggressive tumors in neuroblastoma.

Authors:  Soo Hyun Lee; Jung-Sun Kim; Siyuan Zheng; Jason T Huse; Joon Seol Bae; Ji Won Lee; Keon Hee Yoo; Hong Hoe Koo; Sungkyu Kyung; Woong-Yang Park; Ki W Sung
Journal:  Oncotarget       Date:  2017-07-11

8.  Arid1b haploinsufficient mice reveal neuropsychiatric phenotypes and reversible causes of growth impairment.

Authors:  Cemre Celen; Jen-Chieh Chuang; Xin Luo; Nadine Nijem; Angela K Walker; Fei Chen; Shuyuan Zhang; Andrew S Chung; Liem H Nguyen; Ibrahim Nassour; Albert Budhipramono; Xuxu Sun; Levinus A Bok; Meriel McEntagart; Evelien F Gevers; Shari G Birnbaum; Amelia J Eisch; Craig M Powell; Woo-Ping Ge; Gijs We Santen; Maria Chahrour; Hao Zhu
Journal:  Elife       Date:  2017-07-11       Impact factor: 8.140

9.  Deletions and de novo mutations of SOX11 are associated with a neurodevelopmental disorder with features of Coffin-Siris syndrome.

Authors:  Annmarie Hempel; Alistair T Pagnamenta; Moira Blyth; Sahar Mansour; Vivienne McConnell; Ikuyo Kou; Shiro Ikegawa; Yoshinori Tsurusaki; Naomichi Matsumoto; Adriana Lo-Castro; Ghislaine Plessis; Beate Albrecht; Agatino Battaglia; Jenny C Taylor; Malcolm F Howard; David Keays; Aman Singh Sohal; Susanne J Kühl; Usha Kini; Alisdair McNeill
Journal:  J Med Genet       Date:  2015-11-05       Impact factor: 6.318

10.  Calcium Signaling Pathway Is Associated with the Long-Term Clinical Response to Selective Serotonin Reuptake Inhibitors (SSRI) and SSRI with Antipsychotics in Patients with Obsessive-Compulsive Disorder.

Authors:  Hidehiro Umehara; Shusuke Numata; Atsushi Tajima; Akira Nishi; Masahito Nakataki; Issei Imoto; Satsuki Sumitani; Tetsuro Ohmori
Journal:  PLoS One       Date:  2016-06-09       Impact factor: 3.240

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