Literature DB >> 25670647

Mining drug-disease relationships as a complement to medical genetics-based drug repositioning: Where a recommendation system meets genome-wide association studies.

H Wang1, Q Gu, J Wei, Z Cao, Q Liu.   

Abstract

A novel recommendation-based drug repositioning strategy is presented to simultaneously determine novel drug indications and side effects in one integrated framework. This strategy provides a complementary method to medical genetics-based drug repositioning, which reduces the occurrence of false positives in medical genetics-based drug repositioning, resulting in a ranked list of new candidate indications and/or side effects with different confidence levels. Several new drug indications and side effects are reported with high prediction confidences.
© 2015 American Society for Clinical Pharmacology and Therapeutics.

Mesh:

Year:  2015        PMID: 25670647     DOI: 10.1002/cpt.82

Source DB:  PubMed          Journal:  Clin Pharmacol Ther        ISSN: 0009-9236            Impact factor:   6.875


  14 in total

Review 1.  A review of connectivity map and computational approaches in pharmacogenomics.

Authors:  Aliyu Musa; Laleh Soltan Ghoraie; Shu-Dong Zhang; Galina Glazko; Olli Yli-Harja; Matthias Dehmer; Benjamin Haibe-Kains; Frank Emmert-Streib
Journal:  Brief Bioinform       Date:  2018-05-01       Impact factor: 11.622

2.  Big Data Transforms Discovery-Utilization Therapeutics Continuum.

Authors:  S A Waldman; A Terzic
Journal:  Clin Pharmacol Ther       Date:  2016-03       Impact factor: 6.875

3.  Leveraging Human Genetics to Identify Safety Signals Prior to Drug Marketing Approval and Clinical Use.

Authors:  Rebecca N Jerome; Meghan Morrison Joly; Nan Kennedy; Jana K Shirey-Rice; Dan M Roden; Gordon R Bernard; Kenneth J Holroyd; Joshua C Denny; Jill M Pulley
Journal:  Drug Saf       Date:  2020-06       Impact factor: 5.606

4.  Repurposing paclitaxel for the treatment of fibrosis: indication discovery for existing drugs.

Authors:  Xiao-Wu Chen; Wei Duan; Shu-Feng Zhou
Journal:  Drug Des Devel Ther       Date:  2015-09-07       Impact factor: 4.162

5.  Integrating Clinical Phenotype and Gene Expression Data to Prioritize Novel Drug Uses.

Authors:  H Paik; B Chen; M Sirota; D Hadley; A J Butte
Journal:  CPT Pharmacometrics Syst Pharmacol       Date:  2016-11-14

6.  Drug Repurposing Hypothesis Generation Using the "RE:fine Drugs" System.

Authors:  Kelly Regan; Soheil Moosavinasab; Philip Payne; Simon Lin
Journal:  J Vis Exp       Date:  2016-12-11       Impact factor: 1.355

7.  Celecoxib Enhances the Efficacy of Low-Dose Antibiotic Treatment against Polymicrobial Sepsis in Mice and Clinical Isolates of ESKAPE Pathogens.

Authors:  Madhavi Annamanedi; Gajapati Y N Varma; K Anuradha; Arunasree M Kalle
Journal:  Front Microbiol       Date:  2017-05-08       Impact factor: 5.640

8.  The extraction of drug-disease correlations based on module distance in incomplete human interactome.

Authors:  Liang Yu; Bingbo Wang; Xiaoke Ma; Lin Gao
Journal:  BMC Syst Biol       Date:  2016-12-23

9.  pyMeSHSim: an integrative python package for biomedical named entity recognition, normalization, and comparison of MeSH terms.

Authors:  Zhi-Hui Luo; Meng-Wei Shi; Zhuang Yang; Hong-Yu Zhang; Zhen-Xia Chen
Journal:  BMC Bioinformatics       Date:  2020-06-18       Impact factor: 3.169

10.  Recommender Systems in Antiviral Drug Discovery.

Authors:  Ekaterina A Sosnina; Sergey Sosnin; Anastasia A Nikitina; Ivan Nazarov; Dmitry I Osolodkin; Maxim V Fedorov
Journal:  ACS Omega       Date:  2020-06-21
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