Literature DB >> 2567000

Chromatin configuration of the human CD2 gene locus during T-cell development.

D Wotton1, B F Flanagan, M J Owen.   

Abstract

To investigate the molecular basis for the tissue-specific expression of the human CD2 gene, its chromatin configuration was assessed by determining DNase I hypersensitivity and the degree of methylation during T-cell lineage commitment and development. Tissue-specific DNase I-hypersensitive sites were found within the 5' promoter region and a region 3' of the gene essential for gene expression. DNase I hypersensitivity of the 5' region correlated strictly with transcriptional activity, whereas hypersensitivity of the 3' region correlated with T-cell progenitor activity or lineage commitment but not necessarily with transcription. Hha I and Hpa II sites around the 5' and 3' regions were undermethylated in CD2-expressing T cells but were more extensively methylated in other cell types. These results define likely regulatory elements both upstream and downstream of the CD2 gene that control its tissue-specific expression. Further, they show that the 3' regulatory region adopts an open chromatin configuration prior to lineage commitment and during early stages of T-cell development before the CD2 gene is transcribed.

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Year:  1989        PMID: 2567000      PMCID: PMC287417          DOI: 10.1073/pnas.86.11.4195

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  27 in total

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Authors:  H Weintraub; M Groudine
Journal:  Science       Date:  1976-09-03       Impact factor: 47.728

2.  DNA methylation affects the formation of active chromatin.

Authors:  I Keshet; J Lieman-Hurwitz; H Cedar
Journal:  Cell       Date:  1986-02-28       Impact factor: 41.582

3.  The sequence GGCmCGG is resistant to MspI cleavage.

Authors:  M Busslinger; E deBoer; S Wright; F G Grosveld; R A Flavell
Journal:  Nucleic Acids Res       Date:  1983-06-11       Impact factor: 16.971

4.  DNase I hypersensitive sites in the chromatin of human mu immunoglobulin heavy-chain genes.

Authors:  F C Mills; L M Fisher; R Kuroda; A M Ford; H J Gould
Journal:  Nature       Date:  1983 Dec 22-1984 Jan 4       Impact factor: 49.962

5.  "A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity". Addendum.

Authors:  A P Feinberg; B Vogelstein
Journal:  Anal Biochem       Date:  1984-02       Impact factor: 3.365

6.  Phenotypic heterogeneity and cellular origins of T cell malignancies.

Authors:  M F Greaves; J Rao; G Hariri; W Verbi; D Catovsky; P Kung; G Goldstein
Journal:  Leuk Res       Date:  1981       Impact factor: 3.156

7.  Human CD2 3'-flanking sequences confer high-level, T cell-specific, position-independent gene expression in transgenic mice.

Authors:  D R Greaves; F D Wilson; G Lang; D Kioussis
Journal:  Cell       Date:  1989-03-24       Impact factor: 41.582

8.  Effect of CpG methylation on Msp I.

Authors:  E Keshet; H Cedar
Journal:  Nucleic Acids Res       Date:  1983-06-11       Impact factor: 16.971

9.  Cell-type-specific contacts to immunoglobulin enhancers in nuclei.

Authors:  G M Church; A Ephrussi; W Gilbert; S Tonegawa
Journal:  Nature       Date:  1985 Feb 28-Mar 6       Impact factor: 49.962

10.  Identification of a human T lymphocyte surface protein associated with the E-rosette receptor.

Authors:  M Kamoun; P J Martin; J A Hansen; M A Brown; A W Siadak; R C Nowinski
Journal:  J Exp Med       Date:  1981-01-01       Impact factor: 14.307

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  11 in total

1.  Immunoglobulin heavy-chain and CD3 delta-chain gene enhancers are DNase I-hypersensitive in hemopoietic progenitor cells.

Authors:  A M Ford; C A Bennett; L E Healy; E Navarro; E Spooncer; M F Greaves
Journal:  Proc Natl Acad Sci U S A       Date:  1992-04-15       Impact factor: 11.205

Review 2.  T-cell identity and epigenetic memory.

Authors:  Ellen V Rothenberg; Jingli A Zhang
Journal:  Curr Top Microbiol Immunol       Date:  2012       Impact factor: 4.291

3.  Hypomethylation of the interphotoreceptor retinoid-binding protein (IRBP) promotor and first exon is linked to expression of the gene.

Authors:  A Albini; J Toffenetti; Z Zhu; G J Chader; D M Noonan
Journal:  Nucleic Acids Res       Date:  1990-09-11       Impact factor: 16.971

4.  DNase hypersensitivity and methylation of the human CD3G and D genes during T-cell development.

Authors:  B F Flanagan; D Wotton; S Tuck-Wah; M J Owen
Journal:  Immunogenetics       Date:  1990       Impact factor: 2.846

5.  Developmental regulation of topoisomerase II sites and DNase I-hypersensitive sites in the chicken beta-globin locus.

Authors:  M Reitman; G Felsenfeld
Journal:  Mol Cell Biol       Date:  1990-06       Impact factor: 4.272

6.  Myeloid expression of the human c-fps/fes proto-oncogene in transgenic mice.

Authors:  P Greer; V Maltby; J Rossant; A Bernstein; T Pawson
Journal:  Mol Cell Biol       Date:  1990-06       Impact factor: 4.272

Review 7.  ATP-dependent chromatin remodeling in T cells.

Authors:  Andrea L Wurster; Michael J Pazin
Journal:  Biochem Cell Biol       Date:  2011-10-14       Impact factor: 3.626

8.  Chromatin remodeling of the interleukin-2 gene: distinct alterations in the proximal versus distal enhancer regions.

Authors:  S B Ward; G Hernandez-Hoyos; F Chen; M Waterman; R Reeves; E V Rothenberg
Journal:  Nucleic Acids Res       Date:  1998-06-15       Impact factor: 16.971

9.  Identification and characterization of an Alu-containing, T-cell-specific enhancer located in the last intron of the human CD8 alpha gene.

Authors:  J E Hambor; J Mennone; M E Coon; J H Hanke; P Kavathas
Journal:  Mol Cell Biol       Date:  1993-11       Impact factor: 4.272

10.  A 3' transcriptional enhancer regulates tissue-specific expression of the human CD2 gene.

Authors:  R A Lake; D Wotton; M J Owen
Journal:  EMBO J       Date:  1990-10       Impact factor: 11.598

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