Literature DB >> 25659432

Dpb11 protein helps control assembly of the Cdc45·Mcm2-7·GINS replication fork helicase.

Nalini Dhingra1, Irina Bruck2, Skye Smith2, Boting Ning1, Daniel L Kaplan3.   

Abstract

Dpb11 is required for the initiation of DNA replication in budding yeast. Dpb11 binds to S-phase cyclin-dependent kinase-phosphorylated Sld2 and Sld3 to form a ternary complex during S phase. The replication fork helicase in eukaryotes is composed of Cdc45, Mcm2-7, and GINS. We show here, using purified proteins from budding yeast, that Dpb11 alone binds to Mcm2-7 and that Dpb11 also competes with GINS for binding to Mcm2-7. Furthermore, Dpb11 binds directly to single-stranded DNA (ssDNA), and ssDNA inhibits the Dpb11 interaction with Mcm2-7. We also found that Dpb11 can recruit Cdc45 to Mcm2-7. We identified a mutant of the BRCT4 motif of Dpb11 that remains bound to Mcm2-7 in the presence of ssDNA (dpb11-m1,m2,m3,m5), and this mutant exhibits a DNA replication defect when expressed in budding yeast cells. Expression of this mutant results in increased interaction between Dpb11 and Mcm2-7 during S phase, impaired GINS interaction with Mcm2-7 during S phase, and decreased replication protein A (RPA) interaction with origin DNA during S phase. We propose a model in which Dpb11 first recruits Cdc45 to Mcm2-7. Dpb11, although bound to Cdc45·Mcm2-7, can block the interaction between GINS and Mcm2-7. Upon extrusion of ssDNA from the central channel of Mcm2-7, Dpb11 dissociates from Mcm2-7, and Dpb11 binds to ssDNA, thereby allowing GINS to bind to Cdc45·Mcm2-7. Finally, we propose that Dpb11 functions with Sld2 and Sld3 to help control the assembly of the replication fork helicase.
© 2015 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  Cell Cycle; Cyclin-dependent Kinase (CDK); DNA; DNA Helicase; DNA Replication

Mesh:

Substances:

Year:  2015        PMID: 25659432      PMCID: PMC4367264          DOI: 10.1074/jbc.M115.640383

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  43 in total

1.  Phosphorylation of Sld2 and Sld3 by cyclin-dependent kinases promotes DNA replication in budding yeast.

Authors:  Philip Zegerman; John F X Diffley
Journal:  Nature       Date:  2006-12-13       Impact factor: 49.962

2.  Phosphorylation of MCM4 by Cdc7 kinase facilitates its interaction with Cdc45 on the chromatin.

Authors:  Hisao Masai; Chika Taniyama; Keiko Ogino; Etsuko Matsui; Naoko Kakusho; Seiji Matsumoto; Jung-Min Kim; Ai Ishii; Taku Tanaka; Toshiko Kobayashi; Katsuyuki Tamai; Kiyoshi Ohtani; Ken-Ichi Arai
Journal:  J Biol Chem       Date:  2006-10-17       Impact factor: 5.157

3.  Cdc7-Dbf4 phosphorylates MCM proteins via a docking site-mediated mechanism to promote S phase progression.

Authors:  Yi-Jun Sheu; Bruce Stillman
Journal:  Mol Cell       Date:  2006-10-06       Impact factor: 17.970

4.  Subunit organization of Mcm2-7 and the unequal role of active sites in ATP hydrolysis and viability.

Authors:  Matthew L Bochman; Stephen P Bell; Anthony Schwacha
Journal:  Mol Cell Biol       Date:  2008-07-28       Impact factor: 4.272

5.  The Mcm2-7 complex has in vitro helicase activity.

Authors:  Matthew L Bochman; Anthony Schwacha
Journal:  Mol Cell       Date:  2008-07-25       Impact factor: 17.970

6.  A double-hexameric MCM2-7 complex is loaded onto origin DNA during licensing of eukaryotic DNA replication.

Authors:  Cecile Evrin; Pippa Clarke; Juergen Zech; Rudi Lurz; Jingchuan Sun; Stefan Uhle; Huilin Li; Bruce Stillman; Christian Speck
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-12       Impact factor: 11.205

7.  CDK-dependent phosphorylation of Sld2 and Sld3 initiates DNA replication in budding yeast.

Authors:  Seiji Tanaka; Toshiko Umemori; Kazuyuki Hirai; Sachiko Muramatsu; Yoichiro Kamimura; Hiroyuki Araki
Journal:  Nature       Date:  2006-12-13       Impact factor: 49.962

8.  Activation of the MCM2-7 helicase by association with Cdc45 and GINS proteins.

Authors:  Ivar Ilves; Tatjana Petojevic; James J Pesavento; Michael R Botchan
Journal:  Mol Cell       Date:  2010-01-29       Impact factor: 17.970

9.  Concerted loading of Mcm2-7 double hexamers around DNA during DNA replication origin licensing.

Authors:  Dirk Remus; Fabienne Beuron; Gökhan Tolun; Jack D Griffith; Edward P Morris; John F X Diffley
Journal:  Cell       Date:  2009-11-05       Impact factor: 41.582

10.  The Dbf4-Cdc7 kinase promotes S phase by alleviating an inhibitory activity in Mcm4.

Authors:  Yi-Jun Sheu; Bruce Stillman
Journal:  Nature       Date:  2010-01-07       Impact factor: 49.962

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  13 in total

Review 1.  Mechanisms and regulation of DNA replication initiation in eukaryotes.

Authors:  Matthew W Parker; Michael R Botchan; James M Berger
Journal:  Crit Rev Biochem Mol Biol       Date:  2017-01-17       Impact factor: 8.250

2.  A Positive Amplification Mechanism Involving a Kinase and Replication Initiation Factor Helps Assemble the Replication Fork Helicase.

Authors:  Irina Bruck; Nalini Dhingra; Daniel L Kaplan
Journal:  J Biol Chem       Date:  2017-01-12       Impact factor: 5.157

Review 3.  Multi-BRCT scaffolds use distinct strategies to support genome maintenance.

Authors:  Bingbing Wan; Lisa E Hang; Xiaolan Zhao
Journal:  Cell Cycle       Date:  2016-08-11       Impact factor: 4.534

4.  Insights into the Initiation of Eukaryotic DNA Replication.

Authors:  Irina Bruck; Patricia Perez-Arnaiz; Max K Colbert; Daniel L Kaplan
Journal:  Nucleus       Date:  2015-12-28       Impact factor: 4.197

5.  The Replication Initiation Protein Sld3/Treslin Orchestrates the Assembly of the Replication Fork Helicase during S Phase.

Authors:  Irina Bruck; Daniel L Kaplan
Journal:  J Biol Chem       Date:  2015-09-24       Impact factor: 5.157

6.  Conserved mechanism for coordinating replication fork helicase assembly with phosphorylation of the helicase.

Authors:  Irina Bruck; Daniel L Kaplan
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-24       Impact factor: 11.205

7.  Dpb11 may function with RPA and DNA to initiate DNA replication.

Authors:  Irina Bruck; Nalini Dhingra; Matthew P Martinez; Daniel L Kaplan
Journal:  PLoS One       Date:  2017-05-03       Impact factor: 3.240

Review 8.  Eukaryotic Replicative Helicase Subunit Interaction with DNA and Its Role in DNA Replication.

Authors:  Matthew P Martinez; Amanda L Wacker; Irina Bruck; Daniel L Kaplan
Journal:  Genes (Basel)       Date:  2017-04-06       Impact factor: 4.096

9.  Mcm10 coordinates the timely assembly and activation of the replication fork helicase.

Authors:  Patricia Perez-Arnaiz; Irina Bruck; Daniel L Kaplan
Journal:  Nucleic Acids Res       Date:  2015-11-17       Impact factor: 16.971

10.  An intact Mcm10 coiled-coil interaction surface is important for origin melting, helicase assembly and the recruitment of Pol-α to Mcm2-7.

Authors:  Patricia Perez-Arnaiz; Irina Bruck; Max K Colbert; Daniel L Kaplan
Journal:  Nucleic Acids Res       Date:  2017-07-07       Impact factor: 16.971

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