Literature DB >> 25647324

Impact of genetic variation in the SMIM1 gene on Vel expression levels.

Lonneke Haer-Wigman1, Tamara C Stegmann1, Shabnam Solati1, Aïcha Ait Soussan1, Erik Beckers2, Pim van der Harst3, Marga van Hulst-Sundermeijer4, Peter Ligthart1, Dick van Rhenen5, Hein Schepers6, Masja de Haas1, C Ellen van der Schoot1.   

Abstract

BACKGROUND: Serologic determination of the Vel- phenotype is challenging due to variable Vel expression levels. In this study we investigated the genetic basis for weak Vel expression levels and developed a high-throughput genotyping assay to detect Vel- donors. STUDY DESIGN AND METHODS: In 548 random Caucasian and 107 Vel+(w) donors genetic variation in the SMIM1 gene was studied and correlated to Vel expression levels. A total of 3366 Caucasian, 621 black, and 333 Chinese donors were screened with a high-throughput genotyping assay targeting the SMIM1*64_80del allele.
RESULTS: The Vel+(w) phenotype is in most cases caused by the presence of one SMIM1 allele carrying the major allele of the rs1175550 SNP in combination with a SMIM1*64_80del allele or in few cases caused by the presence of the SMIM1*152T>A or SMIM1*152T>G allele. In approximately 6% of Vel+(w) donors genetic factors in SMIM1 could not explain the weak expression. We excluded the possibility that lack of expression of another blood group system was correlated with weak Vel expression levels. Furthermore, using a high-throughput Vel genotyping assay we detected two Caucasian Vel- donors.
CONCLUSION: Weak Vel expression levels are caused by multiple genetic factors in SMIM1 and probably also by other genetic or environmental factors. Due to the variation in Vel expression levels, serologic determination of the Vel- phenotype is difficult and a genotyping assay targeting the c.64_80del deletion in SMIM1 should be used to screen donors for the Vel- phenotype.
© 2015 AABB.

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Year:  2015        PMID: 25647324     DOI: 10.1111/trf.13014

Source DB:  PubMed          Journal:  Transfusion        ISSN: 0041-1132            Impact factor:   3.157


  8 in total

1.  Genetic factors associated with iron storage in Australian blood donors.

Authors:  Yu Ji; Robert Flower; Catherine Hyland; Nargess Saiepour; Helen Faddy
Journal:  Blood Transfus       Date:  2016-12-21       Impact factor: 3.443

2.  SMIM1 polymorphisms in a donor population from southeast Brazil and their correlation with VEL expression.

Authors:  Carine Prisco Arnoni; Tatiane A De Paula Vendrame; Janaína Guilhem Muniz; Diana Gazito; Rosangela Duarte De Medeiros Person; Afonso J Pereira Cortez; Flavia R M Latini; Lilian Castilho
Journal:  Blood Transfus       Date:  2018-01-11       Impact factor: 3.443

3.  International society of blood transfusion working party on red cell immunogenetics and terminology: report of the Seoul and London meetings.

Authors:  J R Storry; L Castilho; Q Chen; G Daniels; G Denomme; W A Flegel; C Gassner; M de Haas; C Hyland; M Keller; C Lomas-Francis; J M Moulds; N Nogues; M L Olsson; T Peyrard; C E van der Schoot; Y Tani; N Thornton; F Wagner; S Wendel; C Westhoff; V Yahalom
Journal:  ISBT Sci Ser       Date:  2016-06-27

4.  Molecular Screening for Vel- Blood Donors in Southwestern Germany.

Authors:  Carola Wieckhusen; Gabi Rink; Erwin A Scharberg; Sina Rothenberger; Naime Kömürcü; Peter Bugert
Journal:  Transfus Med Hemother       Date:  2015-11-03       Impact factor: 3.747

5.  Systematic Functional Dissection of Common Genetic Variation Affecting Red Blood Cell Traits.

Authors:  Jacob C Ulirsch; Satish K Nandakumar; Li Wang; Felix C Giani; Xiaolan Zhang; Peter Rogov; Alexandre Melnikov; Patrick McDonel; Ron Do; Tarjei S Mikkelsen; Vijay G Sankaran
Journal:  Cell       Date:  2016-06-02       Impact factor: 41.582

6.  SMIM1 variants rs1175550 and rs143702418 independently modulate Vel blood group antigen expression.

Authors:  Mikael K Christophersen; Magnus Jöud; Ram Ajore; Sunitha Vege; Klara W Ljungdahl; Connie M Westhoff; Martin L Olsson; Jill R Storry; Björn Nilsson
Journal:  Sci Rep       Date:  2017-01-13       Impact factor: 4.379

Review 7.  SMIM1 at a glance; discovery, genetic basis, recent progress and perspectives.

Authors:  Yaw Aniweh; Prince B Nyarko; Evelyn Quansah; Laty Gaye Thiam; Gordon A Awandare
Journal:  Parasite Epidemiol Control       Date:  2019-03-06

8.  Identification of a novel single-nucleotide mutation in SMIM1 gene that results in low Vel antigen expression.

Authors:  Marea V E van der Rijst; Lesley Voorn; Barbera Veldhuisen; John M Jongerius; Emile van den Akker; C Ellen van der Schoot
Journal:  Transfusion       Date:  2019-06-19       Impact factor: 3.157

  8 in total

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