Literature DB >> 25642378

Inference and forecast of the current west african ebola outbreak in Guinea, sierra leone and liberia.

Jeffrey Shaman1, Wan Yang1, Sasikiran Kandula1.   

Abstract

The current West African Ebola outbreak poses an unprecedented public health challenge for the world at large. The response of the global community to the epidemic, including deployment of nurses, doctors, epidemiologists, beds, supplies and security, is shaped by our understanding of the spatial-temporal extent and progression of the disease. Ongoing evaluation of the epidemiological characteristics and future course of the Ebola outbreak is needed to stay abreast of any changes to its transmission dynamics, as well as the success or failure of intervention efforts. Here we use observations, dynamic modeling and Bayesian inference to generate simulations and weekly forecasts of the outbreaks in Guinea, Liberia and Sierra Leone. Estimates of key epidemiological characteristics over time indicate continued epidemic growth in West Africa, though there is some evidence of slowing growth in Liberia. 6-week forecasts over successive weeks corroborate these findings; forecasts projecting no future change in intervention efficacy have been more accurate for Guinea and Sierra Leone, but have overestimated incidence and mortality for Liberia.

Entities:  

Year:  2014        PMID: 25642378      PMCID: PMC4234409          DOI: 10.1371/currents.outbreaks.3408774290b1a0f2dd7cae877c8b8ff6

Source DB:  PubMed          Journal:  PLoS Curr        ISSN: 2157-3999


  14 in total

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Authors:  J Legrand; R F Grais; P Y Boelle; A J Valleron; A Flahault
Journal:  Epidemiol Infect       Date:  2006-09-26       Impact factor: 2.451

2.  Temporal variations in the effective reproduction number of the 2014 west Africa ebola outbreak.

Authors:  Sherry Towers; Oscar Patterson-Lomba; Carlos Castillo-Chavez
Journal:  PLoS Curr       Date:  2014-09-18

3.  Assessing the international spreading risk associated with the 2014 west african ebola outbreak.

Authors:  Marcelo F C Gomes; Ana Pastore Y Piontti; Luca Rossi; Dennis Chao; Ira Longini; M Elizabeth Halloran; Alessandro Vespignani
Journal:  PLoS Curr       Date:  2014-09-02

4.  Forecasting seasonal outbreaks of influenza.

Authors:  Jeffrey Shaman; Alicia Karspeck
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-26       Impact factor: 11.205

5.  Estimating the future number of cases in the Ebola epidemic--Liberia and Sierra Leone, 2014-2015.

Authors:  Martin I Meltzer; Charisma Y Atkins; Scott Santibanez; Barbara Knust; Brett W Petersen; Elizabeth D Ervin; Stuart T Nichol; Inger K Damon; Michael L Washington
Journal:  MMWR Suppl       Date:  2014-09-26

6.  Early transmission dynamics of Ebola virus disease (EVD), West Africa, March to August 2014 - Euro surveillance 17 September 2014.

Authors:  D Plachouras; B Sudre; M Testa; E Robesyn; D Coulombier
Journal:  Euro Surveill       Date:  2014-09-18

7.  Modeling the impact of interventions on an epidemic of ebola in sierra leone and liberia.

Authors:  Caitlin M Rivers; Eric T Lofgren; Madhav Marathe; Stephen Eubank; Bryan L Lewis
Journal:  PLoS Curr       Date:  2014-11-06

Review 8.  Aerosol transmission of influenza A virus: a review of new studies.

Authors:  Raymond Tellier
Journal:  J R Soc Interface       Date:  2009-09-22       Impact factor: 4.118

9.  Inapparent infections and cholera dynamics.

Authors:  Aaron A King; Edward L Ionides; Mercedes Pascual; Menno J Bouma
Journal:  Nature       Date:  2008-08-14       Impact factor: 49.962

10.  Ebola virus disease in West Africa--the first 9 months of the epidemic and forward projections.

Authors:  Bruce Aylward; Philippe Barboza; Luke Bawo; Eric Bertherat; Pepe Bilivogui; Isobel Blake; Rick Brennan; Sylvie Briand; Jethro Magwati Chakauya; Kennedy Chitala; Roland M Conteh; Anne Cori; Alice Croisier; Jean-Marie Dangou; Boubacar Diallo; Christl A Donnelly; Christopher Dye; Tim Eckmanns; Neil M Ferguson; Pierre Formenty; Caroline Fuhrer; Keiji Fukuda; Tini Garske; Alex Gasasira; Stephen Gbanyan; Peter Graaff; Emmanuel Heleze; Amara Jambai; Thibaut Jombart; Francis Kasolo; Albert Mbule Kadiobo; Sakoba Keita; Daniel Kertesz; Moussa Koné; Chris Lane; Jered Markoff; Moses Massaquoi; Harriet Mills; John Mike Mulba; Emmanuel Musa; Joel Myhre; Abdusalam Nasidi; Eric Nilles; Pierre Nouvellet; Deo Nshimirimana; Isabelle Nuttall; Tolbert Nyenswah; Olushayo Olu; Scott Pendergast; William Perea; Jonathan Polonsky; Steven Riley; Olivier Ronveaux; Keita Sakoba; Ravi Santhana Gopala Krishnan; Mikiko Senga; Faisal Shuaib; Maria D Van Kerkhove; Rui Vaz; Niluka Wijekoon Kannangarage; Zabulon Yoti
Journal:  N Engl J Med       Date:  2014-09-22       Impact factor: 91.245

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  40 in total

1.  The RAPIDD ebola forecasting challenge: Synthesis and lessons learnt.

Authors:  Cécile Viboud; Kaiyuan Sun; Robert Gaffey; Marco Ajelli; Laura Fumanelli; Stefano Merler; Qian Zhang; Gerardo Chowell; Lone Simonsen; Alessandro Vespignani
Journal:  Epidemics       Date:  2017-08-26       Impact factor: 4.396

2.  Opinion: Mathematical models: a key tool for outbreak response.

Authors:  Eric T Lofgren; M Elizabeth Halloran; Caitlin M Rivers; John M Drake; Travis C Porco; Bryan Lewis; Wan Yang; Alessandro Vespignani; Jeffrey Shaman; Joseph N S Eisenberg; Marisa C Eisenberg; Madhav Marathe; Samuel V Scarpino; Kathleen A Alexander; Rafael Meza; Matthew J Ferrari; James M Hyman; Lauren A Meyers; Stephen Eubank
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-10       Impact factor: 11.205

3.  Assessing the direct effects of the ebola outbreak on life expectancy in liberia, sierra leone and Guinea.

Authors:  Stephane Helleringer; Andrew Noymer
Journal:  PLoS Curr       Date:  2015-02-19

4.  Essential information: Uncertainty and optimal control of Ebola outbreaks.

Authors:  Shou-Li Li; Ottar N Bjørnstad; Matthew J Ferrari; Riley Mummah; Michael C Runge; Christopher J Fonnesbeck; Michael J Tildesley; William J M Probert; Katriona Shea
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-15       Impact factor: 11.205

5.  Improved Discrimination of Influenza Forecast Accuracy Using Consecutive Predictions.

Authors:  Jeffrey Shaman; Sasikiran Kandula
Journal:  PLoS Curr       Date:  2015-10-05

6.  Transmission network of the 2014-2015 Ebola epidemic in Sierra Leone.

Authors:  Wan Yang; Wenyi Zhang; David Kargbo; Ruifu Yang; Yong Chen; Zeliang Chen; Abdul Kamara; Brima Kargbo; Sasikiran Kandula; Alicia Karspeck; Chao Liu; Jeffrey Shaman
Journal:  J R Soc Interface       Date:  2015-11-06       Impact factor: 4.118

7.  The Western Africa ebola virus disease epidemic exhibits both global exponential and local polynomial growth rates.

Authors:  Gerardo Chowell; Cécile Viboud; James M Hyman; Lone Simonsen
Journal:  PLoS Curr       Date:  2015-01-21

8.  EpiCaster: An Integrated Web Application For Situation Assessment and Forecasting of Global Epidemics.

Authors:  Suruchi Deodhar; Keith Bisset; Jiangzhuo Chen; Chris Barrett; Mandy Wilson; Madhav Marathe
Journal:  ACM BCB       Date:  2015-09

9.  Type- and Subtype-Specific Influenza Forecast.

Authors:  Sasikiran Kandula; Wan Yang; Jeffrey Shaman
Journal:  Am J Epidemiol       Date:  2017-03-01       Impact factor: 4.897

10.  Extreme-scale Dynamic Exploration of a Distributed Agent-based Model with the EMEWS Framework.

Authors:  Jonathan Ozik; Nicholson T Collier; Justin M Wozniak; Charles Macal; Gary An
Journal:  IEEE Trans Comput Soc Syst       Date:  2018-08-30
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