| Literature DB >> 25636184 |
Jamile Leão Rêgo1, Joyce Moura Oliveira2, Nadja de Lima Santana2, Paulo Roberto Lima Machado3, Léa Cristina Castellucci3.
Abstract
Mycobacterium leprae infects skin and peripheral nerves causing deformities and disability. The M. leprae bacterium binds to ErbB2 on the Schwann cell surface causing demyelination and favoring spread of the bacilli and causing nerve injury. Polymorphisms at the ERBB2 gene were previously investigated as genetic risk factors for leprosy in two Brazilian populations but with inconsistent results. Herein we extend the analysis of ERBB2 variants to a third geographically distinct population in Brazil. Our results show that there is no association between the genotyped SNPs and the disease (p>0.05) in this population. A gene set or pathway analysis under the genomic region of ERBB2 will be necessary to clarify its regulation under M. leprae stimulus.Entities:
Keywords: ERBB2; Gene analysis; Leprosy
Mesh:
Year: 2015 PMID: 25636184 PMCID: PMC9425388 DOI: 10.1016/j.bjid.2014.12.008
Source DB: PubMed Journal: Braz J Infect Dis ISSN: 1413-8670 Impact factor: 3.257
Characteristics of case–control sample from the population of Bahia, Brazil.
| (A) Patients characteristics | |||
|---|---|---|---|
| Mean age (years) ± SD | Male:female | ||
| Cases | 362 | 42.32 ± 12.88 | 199:163 |
| Controls | 368 | 34.80 ± 10.24 | 258:110 |
Note.
SD, standard deviation; RR reversal reactions; ENL, erythema nodosum leprosum.
RR and ENL patients are also classified under leprosy clinical spectrum.
Details of ERBB2 single nucleotide polymorphisms (SNPs) genotyped in the three populations.
| SNP rs# | Location (Build Hg19) | Cohorts genotyped | Minor allele | Minor allele frequency (Pará/RN/Bahia) | Position/function |
|---|---|---|---|---|---|
| rs2517955 | 37843931 | RN/Bahia | C | 0.49/0.41 | Upstream region |
| rs2517956 | 37844109 | Pará/RN/Bahia | G | 0.38/0.38/0.42 | Upstream region |
| rs1810132 | 37866255 | RN/Bahia | C | 0.39/0.40 | Intronic |
| rs2952156 | 37877085 | Pará/RN/Bahia | A | 0.38/0.38/0.38 | Intronic |
| rs1136201 | 37879838 | RN/Bahia | G | 0.15/0.12 | Coding, non-syn (I655V) |
Note. Cohorts are from Pará, RN and Bahia states in northeastern Brazil.
SNPs associated with leprosy in Pará.
Results of logistic regression analyses for the genotyped ERBB2 polymorphisms.
| ERBB2 alleles | Global test | OR (95% CI) | ||
|---|---|---|---|---|
| 2 df | 1 df | |||
| rs2517955 (T vs. C) | 0.239 | 0.227 | 1.14 (0.92–1.41) | 0.228 |
| rs2517956 (A vs. G) | 0.051 | 0.364 | 1.10 (0.88–1.37) | 0.365 |
| rs1810132 (T vs. C) | 0.179 | 0.406 | 1.10 (0.87–1.40) | 0.407 |
| rs2952156 (G vs. A) | 0.098 | 0.368 | 1.10 (0.88–1.38) | 0.369 |
| rs1136201 (A vs. G) | 0.660 | 0.550 | 1.10 (0.79–1.54) | 0.550 |
Note. The 2 df test represents the genotype-wise test, and the 1 df test represents the allele-wise test. CI, confidence interval; OR, odds ratio. The OR and p-values refer to 1 df tests.