Literature DB >> 25630704

Argonautes team up to silence transposable elements in Arabidopsis.

Charles J Underwood1, Robert A Martienssen1.   

Abstract

The de novo silencing of transposable elements in plants and animals is mediated in part by RNA-directed chromatin modification. In flowering plants, AGO4 has been seen as the key argonauteprotein in the RNA-directed DNA methylation pathway that links the plant-specific RNA polymerase V with the de novo DNA methyltransferase DRM2 (Zhong et al,2014). Two recent papers in The EMBO Journal strongly implicate a role for the AGO6 protein in the process of de novo silencing.

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Year:  2015        PMID: 25630704      PMCID: PMC4365028          DOI: 10.15252/embj.201590971

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  15 in total

1.  The Arabidopsis RNA-directed DNA methylation argonautes functionally diverge based on their expression and interaction with target loci.

Authors:  Ericka R Havecker; Laura M Wallbridge; Thomas J Hardcastle; Maxwell S Bush; Krystyna A Kelly; Ruth M Dunn; Frank Schwach; John H Doonan; David C Baulcombe
Journal:  Plant Cell       Date:  2010-02-19       Impact factor: 11.277

2.  The initiation of epigenetic silencing of active transposable elements is triggered by RDR6 and 21-22 nucleotide small interfering RNAs.

Authors:  Saivageethi Nuthikattu; Andrea D McCue; Kaushik Panda; Dalen Fultz; Christopher DeFraia; Erica N Thomas; R Keith Slotkin
Journal:  Plant Physiol       Date:  2013-03-29       Impact factor: 8.340

3.  A slicer-mediated mechanism for repeat-associated siRNA 5' end formation in Drosophila.

Authors:  Lalith S Gunawardane; Kuniaki Saito; Kazumichi M Nishida; Keita Miyoshi; Yoshinori Kawamura; Tomoko Nagami; Haruhiko Siomi; Mikiko C Siomi
Journal:  Science       Date:  2007-02-22       Impact factor: 47.728

4.  Role of Arabidopsis AGO6 in siRNA accumulation, DNA methylation and transcriptional gene silencing.

Authors:  Xianwu Zheng; Jianhua Zhu; Avnish Kapoor; Jian-Kang Zhu
Journal:  EMBO J       Date:  2007-03-01       Impact factor: 11.598

5.  Role of transposable elements in heterochromatin and epigenetic control.

Authors:  Zachary Lippman; Anne-Valérie Gendrel; Michael Black; Matthew W Vaughn; Neilay Dedhia; W Richard McCombie; Kimberly Lavine; Vivek Mittal; Bruce May; Kristin D Kasschau; James C Carrington; Rebecca W Doerge; Vincent Colot; Rob Martienssen
Journal:  Nature       Date:  2004-07-22       Impact factor: 49.962

6.  ARGONAUTE4 control of locus-specific siRNA accumulation and DNA and histone methylation.

Authors:  Daniel Zilberman; Xiaofeng Cao; Steven E Jacobsen
Journal:  Science       Date:  2003-01-09       Impact factor: 47.728

7.  Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila.

Authors:  Julius Brennecke; Alexei A Aravin; Alexander Stark; Monica Dus; Manolis Kellis; Ravi Sachidanandam; Gregory J Hannon
Journal:  Cell       Date:  2007-03-08       Impact factor: 41.582

8.  AGO6 functions in RNA-mediated transcriptional gene silencing in shoot and root meristems in Arabidopsis thaliana.

Authors:  Changho Eun; Zdravko J Lorkovic; Ulf Naumann; Quan Long; Ericka R Havecker; Stacey A Simon; Blake C Meyers; Antonius J M Matzke; Marjori Matzke
Journal:  PLoS One       Date:  2011-10-05       Impact factor: 3.240

9.  Gene expression and stress response mediated by the epigenetic regulation of a transposable element small RNA.

Authors:  Andrea D McCue; Saivageethi Nuthikattu; Sarah H Reeder; R Keith Slotkin
Journal:  PLoS Genet       Date:  2012-02-09       Impact factor: 5.917

10.  DDR complex facilitates global association of RNA polymerase V to promoters and evolutionarily young transposons.

Authors:  Xuehua Zhong; Christopher J Hale; Julie A Law; Lianna M Johnson; Suhua Feng; Andy Tu; Steven E Jacobsen
Journal:  Nat Struct Mol Biol       Date:  2012-08-05       Impact factor: 15.369

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  1 in total

Review 1.  Regulation of mammalian transcription and splicing by Nuclear RNAi.

Authors:  Roya Kalantari; Cheng-Ming Chiang; David R Corey
Journal:  Nucleic Acids Res       Date:  2015-11-26       Impact factor: 16.971

  1 in total

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