Literature DB >> 25630334

AtCCR4a and AtCCR4b are Involved in Determining the Poly(A) Length of Granule-bound starch synthase 1 Transcript and Modulating Sucrose and Starch Metabolism in Arabidopsis thaliana.

Yuya Suzuki1, Toshihiro Arae1, Pamela J Green2, Junji Yamaguchi3, Yukako Chiba4.   

Abstract

Removing the poly(A) tail is the first and rate-limiting step of mRNA degradation and apparently an effective step not only for modulating mRNA stability but also for translation of many eukaryotic transcripts. Carbon catabolite repressor 4 (CCR4) has been identified as a major cytoplasmic deadenylase in Saccharomyces cerevisiae. The Arabidopsis thaliana homologs of the yeast CCR4, AtCCR4a and AtCCR4b, were identified by sequence-based analysis; however, their role and physiological significance in plants remain to be elucidated. In this study, we revealed that AtCCR4a and AtCCR4b are localized to cytoplasmic mRNA processing bodies, which are specific granules consisting of many enzymes involved in mRNA turnover. Double mutants of AtCCR4a and AtCCR4b exhibited tolerance to sucrose application but not to glucose. The levels of sucrose in the seedlings of the atccr4a/4b double mutants were reduced, whereas no difference was observed in glucose levels. Further, amylose levels were slightly but significantly increased in the atccr4a/4b double mutants. Consistent with this observation, we found that the transcript encoding granule-bound starch synthase 1 (GBSS1), which is responsible for amylose synthesis, is accumulated to a higher level in the atccr4a/4b double mutant plants than in the control plants. Moreover, we revealed that GBSS1 has a longer poly(A) tail in the double mutant than in the control plant, suggesting that AtCCR4a and AtCCR4b can influence the poly(A) length of transcripts related to starch metabolism. Our results collectively suggested that AtCCR4a and AtCCR4b are involved in sucrose and starch metabolism in A. thaliana.
© The Author 2015. Published by Oxford University Press on behalf of Japanese Society of Plant Physiologists. All rights reserved. For permissions, please email: journals.permissions@oup.com.

Entities:  

Keywords:  Arabidopsis thaliana; Carbon catabolite repressor 4; Granule-bound starch synthase 1; Poly(A) length; Sucrose and starch metabolism

Mesh:

Substances:

Year:  2015        PMID: 25630334     DOI: 10.1093/pcp/pcv012

Source DB:  PubMed          Journal:  Plant Cell Physiol        ISSN: 0032-0781            Impact factor:   4.927


  13 in total

1.  Genome-Wide Association Mapping Reveals That Specific and Pleiotropic Regulatory Mechanisms Fine-Tune Central Metabolism and Growth in Arabidopsis.

Authors:  Corina M Fusari; Rik Kooke; Martin A Lauxmann; Maria Grazia Annunziata; Beatrice Enke; Melanie Hoehne; Nicole Krohn; Frank F M Becker; Armin Schlereth; Ronan Sulpice; Mark Stitt; Joost J B Keurentjes
Journal:  Plant Cell       Date:  2017-09-27       Impact factor: 11.277

Review 2.  Interconnections between mRNA degradation and RDR-dependent siRNA production in mRNA turnover in plants.

Authors:  Masayuki Tsuzuki; Kazuki Motomura; Naoyoshi Kumakura; Atsushi Takeda
Journal:  J Plant Res       Date:  2017-02-14       Impact factor: 2.629

Review 3.  Polysomes, Stress Granules, and Processing Bodies: A Dynamic Triumvirate Controlling Cytoplasmic mRNA Fate and Function.

Authors:  Thanin Chantarachot; Julia Bailey-Serres
Journal:  Plant Physiol       Date:  2017-11-20       Impact factor: 8.340

Review 4.  Circadian rhythms and post-transcriptional regulation in higher plants.

Authors:  Andrés Romanowski; Marcelo J Yanovsky
Journal:  Front Plant Sci       Date:  2015-06-12       Impact factor: 5.753

5.  DNA methylation and its effects on gene expression during primary to secondary growth in poplar stems.

Authors:  Yang Zhang; Cong Liu; He Cheng; Shuanghui Tian; Yingying Liu; Shuang Wang; Huaxin Zhang; Muhammad Saqib; Hairong Wei; Zhigang Wei
Journal:  BMC Genomics       Date:  2020-07-20       Impact factor: 3.969

6.  A genome-wide algal mutant library and functional screen identifies genes required for eukaryotic photosynthesis.

Authors:  Xiaobo Li; Weronika Patena; Friedrich Fauser; Robert E Jinkerson; Shai Saroussi; Moritz T Meyer; Nina Ivanova; Jacob M Robertson; Rebecca Yue; Ru Zhang; Josep Vilarrasa-Blasi; Tyler M Wittkopp; Silvia Ramundo; Sean R Blum; Audrey Goh; Matthew Laudon; Tharan Srikumar; Paul A Lefebvre; Arthur R Grossman; Martin C Jonikas
Journal:  Nat Genet       Date:  2019-03-18       Impact factor: 38.330

7.  Novel interaction between CCR4 and CAF1 in rice CCR4-NOT deadenylase complex.

Authors:  Wei-Lun Chou; Yue-Lin Chung; Jhen-Cheng Fang; Chung-An Lu
Journal:  Plant Mol Biol       Date:  2016-10-06       Impact factor: 4.076

8.  A CCR4-associated factor 1, OsCAF1B, confers tolerance of low-temperature stress to rice seedlings.

Authors:  Jhen-Cheng Fang; Yin-Chuan Tsai; Wei-Lun Chou; Hsin-Yi Liu; Chun-Chen Chang; Shaw-Jye Wu; Chung-An Lu
Journal:  Plant Mol Biol       Date:  2020-10-06       Impact factor: 4.076

Review 9.  Regulation of mRNA decay in plant responses to salt and osmotic stress.

Authors:  Dorota Kawa; Christa Testerink
Journal:  Cell Mol Life Sci       Date:  2016-09-27       Impact factor: 9.261

10.  CCR4, a RNA decay factor, is hijacked by a plant cytorhabdovirus phosphoprotein to facilitate virus replication.

Authors:  Zhen-Jia Zhang; Qiang Gao; Xiao-Dong Fang; Zhi-Hang Ding; Dong-Min Gao; Wen-Ya Xu; Qing Cao; Ji-Hui Qiao; Yi-Zhou Yang; Chenggui Han; Ying Wang; Xuefeng Yuan; Dawei Li; Xian-Bing Wang
Journal:  Elife       Date:  2020-03-24       Impact factor: 8.140

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