Literature DB >> 25626150

Diversity in mechanism and function of tRNA methyltransferases.

William E Swinehart1, Jane E Jackman.   

Abstract

tRNA molecules undergo extensive post-transcriptional processing to generate the mature functional tRNA species that are essential for translation in all organisms. These processing steps include the introduction of numerous specific chemical modifications to nucleotide bases and sugars; among these modifications, methylation reactions are by far the most abundant. The tRNA methyltransferases comprise a diverse enzyme superfamily, including members of multiple structural classes that appear to have arisen independently during evolution. Even among closely related family members, examples of unusual substrate specificity and chemistry have been observed. Here we review recent advances in tRNA methyltransferase mechanism and function with a particular emphasis on discoveries of alternative substrate specificities and chemistry associated with some methyltransferases. Although the molecular function for a specific tRNA methylation may not always be clear, mutations in tRNA methyltransferases have been increasingly associated with human disease. The impact of tRNA methylation on human biology is also discussed.

Entities:  

Keywords:  S-adenosyl methionine; methyltransferase; tRNA

Mesh:

Substances:

Year:  2015        PMID: 25626150      PMCID: PMC4615162          DOI: 10.1080/15476286.2015.1008358

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  132 in total

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2.  Structure of the yeast tRNA m7G methylation complex.

Authors:  Nicolas Leulliot; Maxime Chaillet; Dominique Durand; Nathalie Ulryck; Karine Blondeau; Herman van Tilbeurgh
Journal:  Structure       Date:  2008-01       Impact factor: 5.006

3.  A catalytic intermediate and several flavin redox states stabilized by folate-dependent tRNA methyltransferase from Bacillus subtilis.

Authors:  Djemel Hamdane; Vincent Guerineau; Sun Un; Beatrice Golinelli-Pimpaneau
Journal:  Biochemistry       Date:  2011-05-18       Impact factor: 3.162

4.  Antigen-specific and persistent tuberculin anergy in a cohort of pulmonary tuberculosis patients from rural Cambodia.

Authors:  Julio C Delgado; Eunice Y Tsai; Sok Thim; Andres Baena; Vassiliki A Boussiotis; Jean-Marc Reynes; Sun Sath; Pierre Grosjean; Edmond J Yunis; Anne E Goldfeld
Journal:  Proc Natl Acad Sci U S A       Date:  2002-05-28       Impact factor: 11.205

5.  The human tRNA m (5) C methyltransferase Misu is multisite-specific.

Authors:  Sylvie Auxilien; Vincent Guérineau; Zofia Szweykowska-Kulińska; Béatrice Golinelli-Pimpaneau
Journal:  RNA Biol       Date:  2012-09-20       Impact factor: 4.652

6.  Structure of a TrmA-RNA complex: A consensus RNA fold contributes to substrate selectivity and catalysis in m5U methyltransferases.

Authors:  Akram Alian; Tom T Lee; Sarah L Griner; Robert M Stroud; Janet Finer-Moore
Journal:  Proc Natl Acad Sci U S A       Date:  2008-05-01       Impact factor: 11.205

7.  Nuclear surveillance and degradation of hypomodified initiator tRNAMet in S. cerevisiae.

Authors:  Sujatha Kadaba; Anna Krueger; Tamyra Trice; Annette M Krecic; Alan G Hinnebusch; James Anderson
Journal:  Genes Dev       Date:  2004-05-14       Impact factor: 11.361

8.  Degradation of several hypomodified mature tRNA species in Saccharomyces cerevisiae is mediated by Met22 and the 5'-3' exonucleases Rat1 and Xrn1.

Authors:  Irina Chernyakov; Joseph M Whipple; Lakmal Kotelawala; Elizabeth J Grayhack; Eric M Phizicky
Journal:  Genes Dev       Date:  2008-04-28       Impact factor: 11.361

9.  Evidence that tRNA modifying enzymes are important in vivo targets for 5-fluorouracil in yeast.

Authors:  Marie Gustavsson; Hans Ronne
Journal:  RNA       Date:  2008-02-26       Impact factor: 4.942

10.  Conservation of structure and mechanism by Trm5 enzymes.

Authors:  Thomas Christian; Howard Gamper; Ya-Ming Hou
Journal:  RNA       Date:  2013-07-25       Impact factor: 4.942

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  27 in total

1.  TRMT1-Catalyzed tRNA Modifications Are Required for Redox Homeostasis To Ensure Proper Cellular Proliferation and Oxidative Stress Survival.

Authors:  Joshua M Dewe; Benjamin L Fuller; Jenna M Lentini; Stefanie M Kellner; Dragony Fu
Journal:  Mol Cell Biol       Date:  2017-10-13       Impact factor: 4.272

2.  Resistome of Staphylococcus aureus in Response to Human Cathelicidin LL-37 and Its Engineered Antimicrobial Peptides.

Authors:  Radha M Golla; Biswajit Mishra; Xiangli Dang; Jayaram Lakshmaiah Narayana; Amy Li; Libin Xu; Guangshun Wang
Journal:  ACS Infect Dis       Date:  2020-05-11       Impact factor: 5.084

Review 3.  The Evolution of Substrate Specificity by tRNA Modification Enzymes.

Authors:  Katherine M McKenney; Mary Anne T Rubio; Juan D Alfonzo
Journal:  Enzymes       Date:  2017-04-26

4.  The Bacillus subtilis open reading frame ysgA encodes the SPOUT methyltransferase RlmP forming 2'-O-methylguanosine at position 2553 in the A-loop of 23S rRNA.

Authors:  Martine Roovers; Geoffray Labar; Philippe Wolff; André Feller; Dany Van Elder; Romuald Soin; Cyril Gueydan; Véronique Kruys; Louis Droogmans
Journal:  RNA       Date:  2022-06-16       Impact factor: 5.636

5.  A Family Divided: Distinct Structural and Mechanistic Features of the SpoU-TrmD (SPOUT) Methyltransferase Superfamily.

Authors:  Aiswarya Krishnamohan; Jane E Jackman
Journal:  Biochemistry       Date:  2018-12-03       Impact factor: 3.162

Review 6.  RNA-modifying proteins as anticancer drug targets.

Authors:  P Ann Boriack-Sjodin; Scott Ribich; Robert A Copeland
Journal:  Nat Rev Drug Discov       Date:  2018-05-18       Impact factor: 84.694

Review 7.  RNA methylation in chloroplasts or mitochondria in plants.

Authors:  Stefano Manduzio; Hunseung Kang
Journal:  RNA Biol       Date:  2021-04-05       Impact factor: 4.652

Review 8.  RNA modifications and the link to human disease.

Authors:  Amber Yanas; Kathy Fange Liu
Journal:  Methods Enzymol       Date:  2019-09-03       Impact factor: 1.682

Review 9.  From Prebiotics to Probiotics: The Evolution and Functions of tRNA Modifications.

Authors:  Katherine M McKenney; Juan D Alfonzo
Journal:  Life (Basel)       Date:  2016-03-14

10.  Binding synergy as an essential step for tRNA editing and modification enzyme codependence in Trypanosoma brucei.

Authors:  Katherine M McKenney; Mary Anne T Rubio; Juan D Alfonzo
Journal:  RNA       Date:  2017-10-17       Impact factor: 4.942

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