Literature DB >> 33779501

RNA methylation in chloroplasts or mitochondria in plants.

Stefano Manduzio1, Hunseung Kang1.   

Abstract

Recent advances in our understanding of epitranscriptomic RNA methylation have expanded the complexity of gene expression regulation beyond epigenetic regulation involving DNA methylation and histone modifications. The instalment, removal, and interpretation of methylation marks on RNAs are carried out by writers (methyltransferases), erasers (demethylases), and readers (RNA-binding proteins), respectively. Contrary to an emerging body of evidence demonstrating the importance of RNA methylation in the diverse fates of RNA molecules, including splicing, export, translation, and decay in the nucleus and cytoplasm, their roles in plant organelles remain largely unclear and are only now being discovered. In particular, extremely high levels of methylation marks in chloroplast and mitochondrial RNAs suggest that RNA methylation plays essential roles in organellar biogenesis and functions in plants that are crucial for plant development and responses to environmental stimuli. Thus, unveiling the cellular components involved in RNA methylation in cell organelles is essential to better understand plant biology.

Entities:  

Keywords:  Chloroplast; Epitranscriptome; Mitochondria; RNA modification; RNAmethylation

Mesh:

Substances:

Year:  2021        PMID: 33779501      PMCID: PMC8632092          DOI: 10.1080/15476286.2021.1909321

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  125 in total

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Journal:  Curr Biol       Date:  2019-07-18       Impact factor: 10.834

2.  The m1A landscape on cytosolic and mitochondrial mRNA at single-base resolution.

Authors:  Modi Safra; Aldema Sas-Chen; Ronit Nir; Roni Winkler; Aharon Nachshon; Dan Bar-Yaacov; Matthias Erlacher; Walter Rossmanith; Noam Stern-Ginossar; Schraga Schwartz
Journal:  Nature       Date:  2017-10-25       Impact factor: 49.962

3.  Mitochondrial ribosomal RNA (rRNA) methyltransferase family members are positioned to modify nascent rRNA in foci near the mitochondrial DNA nucleoid.

Authors:  Ken-Wing Lee; Cynthia Okot-Kotber; Joseph F LaComb; Daniel F Bogenhagen
Journal:  J Biol Chem       Date:  2013-09-13       Impact factor: 5.157

4.  Assignment of 2'-O-methyltransferases to modification sites on the mammalian mitochondrial large subunit 16 S ribosomal RNA (rRNA).

Authors:  Ken-Wing Lee; Daniel F Bogenhagen
Journal:  J Biol Chem       Date:  2014-07-29       Impact factor: 5.157

5.  Identifying the methyltransferases for m(5)U747 and m(5)U1939 in 23S rRNA using MALDI mass spectrometry.

Authors:  Christian Toft Madsen; Jonas Mengel-Jørgensen; Finn Kirpekar; Stephen Douthwaite
Journal:  Nucleic Acids Res       Date:  2003-08-15       Impact factor: 16.971

Review 6.  Recent advances in the study of chloroplast gene expression and its evolution.

Authors:  Yusuke Yagi; Takashi Shiina
Journal:  Front Plant Sci       Date:  2014-02-25       Impact factor: 5.753

7.  Identification of factors required for m6 A mRNA methylation in Arabidopsis reveals a role for the conserved E3 ubiquitin ligase HAKAI.

Authors:  Kamil Růžička; Mi Zhang; Ana Campilho; Zsuzsanna Bodi; Muhammad Kashif; Mária Saleh; Dominique Eeckhout; Sedeer El-Showk; Hongying Li; Silin Zhong; Geert De Jaeger; Nigel P Mongan; Jan Hejátko; Ykä Helariutta; Rupert G Fray
Journal:  New Phytol       Date:  2017-05-15       Impact factor: 10.151

8.  Zc3h13/Flacc is required for adenosine methylation by bridging the mRNA-binding factor Rbm15/Spenito to the m6A machinery component Wtap/Fl(2)d.

Authors:  Philip Knuckles; Tina Lence; Irmgard U Haussmann; Dominik Jacob; Nastasja Kreim; Sarah H Carl; Irene Masiello; Tina Hares; Rodrigo Villaseñor; Daniel Hess; Miguel A Andrade-Navarro; Marco Biggiogera; Mark Helm; Matthias Soller; Marc Bühler; Jean-Yves Roignant
Journal:  Genes Dev       Date:  2018-03-13       Impact factor: 11.361

9.  NSUN2 introduces 5-methylcytosines in mammalian mitochondrial tRNAs.

Authors:  Lindsey Van Haute; Song-Yi Lee; Beverly J McCann; Christopher A Powell; Dhiru Bansal; Lina Vasiliauskaitė; Caterina Garone; Sanghee Shin; Jong-Seo Kim; Michaela Frye; Joseph G Gleeson; Eric A Miska; Hyun-Woo Rhee; Michal Minczuk
Journal:  Nucleic Acids Res       Date:  2019-09-19       Impact factor: 16.971

10.  A mitochondrial rRNA dimethyladenosine methyltransferase in Arabidopsis.

Authors:  Uwe Richter; Kristina Kühn; Sachiko Okada; Axel Brennicke; Andreas Weihe; Thomas Börner
Journal:  Plant J       Date:  2009-11-19       Impact factor: 6.417

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  2 in total

Review 1.  The Chloroplast Epitranscriptome: Factors, Sites, Regulation, and Detection Methods.

Authors:  Nikolay Manavski; Alexandre Vicente; Wei Chi; Jörg Meurer
Journal:  Genes (Basel)       Date:  2021-07-24       Impact factor: 4.096

2.  AtRsmD Is Required for Chloroplast Development and Chloroplast Function in Arabidopsis thaliana.

Authors:  Zi-Yuan Wang; Wan-Tong Qu; Tong Mei; Nan Zhang; Nai-Ying Yang; Xiao-Feng Xu; Hai-Bo Xiong; Zhong-Nan Yang; Qing-Bo Yu
Journal:  Front Plant Sci       Date:  2022-04-25       Impact factor: 5.753

  2 in total

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