| Literature DB >> 25625228 |
Victoria L O'Nion, Hernan J Montilla, Barbara A Qurollo, Ricardo G Maggi, Barbara C Hegarty, Susan J Tornquist, Edward B Breitschwerdt.
Abstract
Ehrlichia sp. DNA was amplified from 4 Ehrlichia-seroreactive horses from Mérida, Nicaragua. Sequencing of 16S rDNA, sodB, and groEL genes indicated that the bacterium is most likely a novel Ehrlichia species. The tick vector and the potential for canine and human infection remain unknown.Entities:
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Year: 2015 PMID: 25625228 PMCID: PMC4313632 DOI: 10.3201/eid2102.140290
Source DB: PubMed Journal: Emerg Infect Dis ISSN: 1080-6040 Impact factor: 6.883
Base pair similarities for DNA sequences of novel Ehrlichia species obtained from horses in Nicaragua in 2013*
| Bacteria | GenBank accession nos.† | Gene, no. positive/no. tested (%) | ||
|---|---|---|---|---|
|
|
| |||
|
| CR925678 | 361/374 (96.5) | 534/590 (90.5) | 508/599 (84.8) |
|
| CP000107 | 356/374 (95.2) | 540/590 (91.5) | 496/599 (82.8) |
|
| CP000236 | 360/374 (96.2) | 529/590 (89.7) | 491/599 (82.0) |
|
| NR_044747, AF195273, KC778986 | 352/374 (94.1) | 530/590 (89.8) | 241/306 (78.8) |
|
| CP006847 | 339/374 (90.6) | 417/590 (70.8) | 348/599 (58.1) |
|
| CP006618 | 348/374 (93.0) | 439/590 (74.4) | 367/599 (61.2) |
|
| CP001431 | 306/374 (81.8) | 395/590 (66.9) | 358/599 (59.8) |
*Sequences for partial 16S rRNA, GroEl, and SodB genes are compared with GenBank database sequences from Ehrlichia ruminantium, E. canis, E. chaffeensis, E. ewingii, Anaplasma marginale, A. phagocytophilum, and Neorickettsia risticii. †GenBank sequence accession numbers for 16S rRNA, GroEl, and SodB for Ehrlichia sp. from horses in Nicaragua are KJ434178, KJ434179, and KJ434180, respectively.
FigurePhylogenetic trees of Ehrlichia sp. from horses in Nicaragua and selected bacterial species (GenBank accession numbers for reference sequences in parenthesis) based on partial sequences from genes coding for 16SrRNA (A), GroEL (B), and SodB (C). Sequences were aligned by using MUSCLE version 3.7 (http://www.ebi.ac.uk/Tools/msa/muscle/), and alignments were refined by using Gblocks version 0.91b (http://www.idtdna.com/gblocks.com). Phylogenetic trees were constructed by using PhyML version 3.0 aLRT (http://code.google.com/p/phyml/) under the HKY85 model, and the resulting trees were rendered by using TreeDyn version 198.3 (http://www.treedyn.org/). Scale bars indicate number of substitutions per site, and the numbers in the branches represent percentage support of the node.