Literature DB >> 25621515

Brachypodium distachyon and Setaria viridis: Model Genetic Systems for the Grasses.

Thomas P Brutnell1, Jeffrey L Bennetzen, John P Vogel.   

Abstract

The family of grasses encompasses the world's most important food, feed, and bioenergy crops, yet we are only now beginning to develop the genetic resources to explore the diversity of form and function that underlies economically important traits. Two emerging model systems, Brachypodium distachyon and Setaria viridis, promise to greatly accelerate the process of gene discovery in the grasses and to serve as bridges in the exploration of panicoid and pooid grasses, arguably two of the most important clades of plants from a food security perspective. We provide both a historical view of the development of plant model systems and highlight several recent reports that are providing these developing communities with the tools for gene discovery and pathway engineering.

Entities:  

Keywords:  forward genetics; genomics; high-throughput sequencing; reverse genetics

Mesh:

Year:  2015        PMID: 25621515     DOI: 10.1146/annurev-arplant-042811-105528

Source DB:  PubMed          Journal:  Annu Rev Plant Biol        ISSN: 1543-5008            Impact factor:   26.379


  43 in total

1.  Establishment of a vernalization requirement in Brachypodium distachyon requires REPRESSOR OF VERNALIZATION1.

Authors:  Daniel P Woods; Thomas S Ream; Frédéric Bouché; Joohyun Lee; Nicholas Thrower; Curtis Wilkerson; Richard M Amasino
Journal:  Proc Natl Acad Sci U S A       Date:  2017-06-05       Impact factor: 11.205

Review 2.  Growing Out of Stress: The Role of Cell- and Organ-Scale Growth Control in Plant Water-Stress Responses.

Authors:  Wei Feng; Heike Lindner; Neil E Robbins; José R Dinneny
Journal:  Plant Cell       Date:  2016-08-08       Impact factor: 11.277

3.  Genetic Architecture of Flowering-Time Variation in Brachypodium distachyon.

Authors:  Daniel P Woods; Ryland Bednarek; Frédéric Bouché; Sean P Gordon; John P Vogel; David F Garvin; Richard M Amasino
Journal:  Plant Physiol       Date:  2016-10-14       Impact factor: 8.340

Review 4.  Plant science's next top models.

Authors:  Igor Cesarino; Raffaele Dello Ioio; Gwendolyn K Kirschner; Michael S Ogden; Kelsey L Picard; Madlen I Rast-Somssich; Marc Somssich
Journal:  Ann Bot       Date:  2020-06-19       Impact factor: 4.357

5.  The Next Generation of Training for Arabidopsis Researchers: Bioinformatics and Quantitative Biology.

Authors:  Joanna Friesner; Sarah M Assmann; Ruth Bastow; Julia Bailey-Serres; Jim Beynon; Volker Brendel; C Robin Buell; Alexander Bucksch; Wolfgang Busch; Taku Demura; Jose R Dinneny; Colleen J Doherty; Andrea L Eveland; Pascal Falter-Braun; Malia A Gehan; Michael Gonzales; Erich Grotewold; Rodrigo Gutierrez; Ute Kramer; Gabriel Krouk; Shisong Ma; R J Cody Markelz; Molly Megraw; Blake C Meyers; James A H Murray; Nicholas J Provart; Sue Rhee; Roger Smith; Edgar P Spalding; Crispin Taylor; Tracy K Teal; Keiko U Torii; Chris Town; Matthew Vaughn; Richard Vierstra; Doreen Ware; Olivia Wilkins; Cranos Williams; Siobhan M Brady
Journal:  Plant Physiol       Date:  2017-12       Impact factor: 8.340

6.  Differential growth responses of Brachypodium distachyon genotypes to inoculation with plant growth promoting rhizobacteria.

Authors:  Fernanda P do Amaral; Vânia C S Pankievicz; Ana Carolina M Arisi; Emanuel M de Souza; Fabio Pedrosa; Gary Stacey
Journal:  Plant Mol Biol       Date:  2016-02-13       Impact factor: 4.076

7.  Exploring natural variation for rice sheath blight resistance in Brachypodium distachyon.

Authors:  Upinder S Gill; Seonghee Lee; Yulin Jia; Kirankumar S Mysore
Journal:  Plant Signal Behav       Date:  2018-12-12

8.  Brassinosteroids Modulate Meristem Fate and Differentiation of Unique Inflorescence Morphology in Setaria viridis.

Authors:  Jiani Yang; Shuiyi Thames; Norman B Best; Hui Jiang; Pu Huang; Brian P Dilkes; Andrea L Eveland
Journal:  Plant Cell       Date:  2017-12-20       Impact factor: 11.277

9.  Grasses suppress shoot-borne roots to conserve water during drought.

Authors:  Jose Sebastian; Muh-Ching Yee; Willian Goudinho Viana; Rubén Rellán-Álvarez; Max Feldman; Henry D Priest; Charlotte Trontin; Tak Lee; Hui Jiang; Ivan Baxter; Todd C Mockler; Frank Hochholdinger; Thomas P Brutnell; José R Dinneny
Journal:  Proc Natl Acad Sci U S A       Date:  2016-07-15       Impact factor: 11.205

Review 10.  Brachypodium: A Monocot Grass Model Genus for Plant Biology.

Authors:  Karen-Beth G Scholthof; Sonia Irigoyen; Pilar Catalan; Kranthi K Mandadi
Journal:  Plant Cell       Date:  2018-07-11       Impact factor: 11.277

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