Literature DB >> 25615965

Structures of Drosophila melanogaster Rab2 and Rab3 bound to GMPPNP.

Jennifer A Lardong1, Jan H Driller1, Harald Depner2, Christoph Weise3, Astrid Petzoldt2, Markus C Wahl1, Stephan J Sigrist2, Bernhard Loll1.   

Abstract

Rab GTPases belong to the large family of Ras proteins. They act as key regulators of membrane organization and intracellular trafficking. Functionally, they act as switches. In the active GTP-bound form they can bind to effector proteins to facilitate the delivery of transport vesicles. Upon stimulation, the GTP is hydrolyzed and the Rab proteins undergo conformational changes in their switch regions. This study focuses on Rab2 and Rab3 from Drosophila melanogaster. Whereas Rab2 is involved in vesicle transport between the Golgi and the endoplasmatic reticulum, Rab3 is a key player in exocytosis, and in the synapse it is involved in the assembly of the presynaptic active zone. Here, high-resolution crystal structures of Rab2 and Rab3 in complex with GMPPNP and Mg2+ are presented. In the structure of Rab3 a modified cysteine residue is observed with an enigmatic electron density attached to its thiol function.

Entities:  

Keywords:  GMPPNP; GTPase; Rab; cysteine modification

Mesh:

Substances:

Year:  2015        PMID: 25615965      PMCID: PMC4304744          DOI: 10.1107/S2053230X1402617X

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  44 in total

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Journal:  Nat Rev Mol Cell Biol       Date:  2001-02       Impact factor: 94.444

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Journal:  FASEB J       Date:  1996-10       Impact factor: 5.191

Review 3.  Rab proteins: the key regulators of intracellular vesicle transport.

Authors:  Tanmay Bhuin; Jagat Kumar Roy
Journal:  Exp Cell Res       Date:  2014-08-01       Impact factor: 3.905

4.  Biological and biochemical properties of human rasH genes mutated at codon 61.

Authors:  C J Der; T Finkel; G M Cooper
Journal:  Cell       Date:  1986-01-17       Impact factor: 41.582

Review 5.  Vesicular transport: how many Ypt/Rab-GTPases make a eukaryotic cell?

Authors:  T Lazar; M Götte; D Gallwitz
Journal:  Trends Biochem Sci       Date:  1997-12       Impact factor: 13.807

6.  RNA specificity and regulation of catalysis in the eukaryotic polynucleotide kinase Clp1.

Authors:  Aytac Dikfidan; Bernhard Loll; Cathleen Zeymer; Iris Magler; Tim Clausen; Anton Meinhart
Journal:  Mol Cell       Date:  2014-05-08       Impact factor: 17.970

7.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

8.  Rab and Arl GTPase family members cooperate in the localization of the golgin GCC185.

Authors:  Alondra Schweizer Burguete; Timothy D Fenn; Axel T Brunger; Suzanne R Pfeffer
Journal:  Cell       Date:  2008-01-25       Impact factor: 41.582

9.  MolProbity: all-atom structure validation for macromolecular crystallography.

Authors:  Vincent B Chen; W Bryan Arendall; Jeffrey J Headd; Daniel A Keedy; Robert M Immormino; Gary J Kapral; Laura W Murray; Jane S Richardson; David C Richardson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-12-21

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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  2 in total

1.  Structural and Biophysical Characterization of Rab5a from Leishmania Donovani.

Authors:  Diva Maheshwari; Rahul Yadav; Ruchir Rastogi; Anupam Jain; Sarita Tripathi; Amitabha Mukhopadhyay; Ashish Arora
Journal:  Biophys J       Date:  2018-08-30       Impact factor: 4.033

2.  Mutational Analysis of Rab3 Function for Controlling Active Zone Protein Composition at the Drosophila Neuromuscular Junction.

Authors:  Shirui Chen; Hannah K Gendelman; John P Roche; Peter Alsharif; Ethan R Graf
Journal:  PLoS One       Date:  2015-08-28       Impact factor: 3.240

  2 in total

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