Literature DB >> 25608890

Differential expression of α-L-arabinofuranosidases during maize (Zea mays L.) root elongation.

Liudmila V Kozlova1, Oleg V Gorshkov, Natalia E Mokshina, Tatyana A Gorshkova.   

Abstract

MAIN
CONCLUSION: Specific α- l -arabinofuranosidases are involved in the realisation of elongation growth process in cells with type II cell walls. Elongation growth in a plant cell is largely based on modification of the cell wall. In type II cell walls, the Ara/Xyl ratio is known to decrease during elongation due to the partial removal of Ara residues from glucuronoarabinoxylan. We searched within the maize genome for the genes of all predicted α-L-arabinofuranosidases that may be responsible for such a process and related their expression to the activity of the enzyme and the amount of free arabinose measured in six zones of a growing maize root. Eight genes of the GH51 family (ZmaABFs) and one gene of the GH3 family (ZmaARA-I) were identified. The abundance of ZmaABF1 and 3-6 transcripts was highly correlated with the measured enzymatic activity and free arabinose content that significantly increased during elongation. The transcript abundances also coincided with the pattern of changes in the Ara/Xyl ratio of the xylanase-extractable glucuronoarabinoxylan described in previous studies. The expression of ZmaABF3, 5 and 6 was especially up-regulated during elongation although corresponding proteins are devoid of the catalytic glutamate at the proper position. ZmaABF2 transcripts were specifically enriched in the root cap and meristem. A single ZmaARA-I gene was not expressed as a whole gene but instead as splice variants that encode the C-terminal end of the protein. Changes in the ZmaARA-I transcript level were rather moderate and had no significant correlation with free arabinose content. Thus, elongation growth of cells with type II cell walls is accompanied by the up-regulation of specific and predicted α-L-arabinofuranosidase genes, and the corresponding activity is indeed pronounced and is important for the modification of glucuronoarabinoxylan, which plays a key role in the modification of the cell wall supramolecular organisation.

Entities:  

Mesh:

Substances:

Year:  2015        PMID: 25608890     DOI: 10.1007/s00425-015-2244-1

Source DB:  PubMed          Journal:  Planta        ISSN: 0032-0935            Impact factor:   4.116


  42 in total

1.  Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.

Authors:  K J Livak; T D Schmittgen
Journal:  Methods       Date:  2001-12       Impact factor: 3.608

Review 2.  Alpha-L-arabinofuranosidases: the potential applications in biotechnology.

Authors:  Mondher Th Numan; Narayan B Bhosle
Journal:  J Ind Microbiol Biotechnol       Date:  2005-12-30       Impact factor: 3.346

3.  Cell wall proteome in the maize primary root elongation zone. I. Extraction and identification of water-soluble and lightly ionically bound proteins.

Authors:  Jinming Zhu; Sixue Chen; Sophie Alvarez; Victor S Asirvatham; Daniel P Schachtman; Yajun Wu; Robert E Sharp
Journal:  Plant Physiol       Date:  2005-12-23       Impact factor: 8.340

4.  New families in the classification of glycosyl hydrolases based on amino acid sequence similarities.

Authors:  B Henrissat; A Bairoch
Journal:  Biochem J       Date:  1993-08-01       Impact factor: 3.857

5.  A novel type of arabinoxylan arabinofuranohydrolase isolated from germinated barley analysis of substrate preference and specificity by nano-probe NMR.

Authors:  H Ferré; A Broberg; J O Duus; K K Thomsen
Journal:  Eur J Biochem       Date:  2000-11

6.  Barley arabinoxylan arabinofuranohydrolases: purification, characterization and determination of primary structures from cDNA clones.

Authors:  R C Lee; R A Burton; M Hrmova; G B Fincher
Journal:  Biochem J       Date:  2001-05-15       Impact factor: 3.857

7.  Purification and characterization of alpha-L-arabinofuranosidase from Bacillus stearothermophilus T-6.

Authors:  S Gilead; Y Shoham
Journal:  Appl Environ Microbiol       Date:  1995-01       Impact factor: 4.792

8.  Immunohistochemical localization of hemicelluloses and pectins varies during tissue development in the bamboo culm.

Authors:  Kiyoshi Suzuki; Shinichi Kitamura; Yoshiaki Sone; Takao Itoh
Journal:  Histochem J       Date:  2002

9.  The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications.

Authors: 
Journal:  BMC Biol       Date:  2005-09-27       Impact factor: 7.431

10.  The roles of whole-genome and small-scale duplications in the functional specialization of Saccharomyces cerevisiae genes.

Authors:  Mario A Fares; Orla M Keane; Christina Toft; Lorenzo Carretero-Paulet; Gary W Jones
Journal:  PLoS Genet       Date:  2013-01-03       Impact factor: 5.917

View more
  3 in total

1.  Elongating maize root: zone-specific combinations of polysaccharides from type I and type II primary cell walls.

Authors:  Liudmila V Kozlova; Alsu R Nazipova; Oleg V Gorshkov; Anna A Petrova; Tatyana A Gorshkova
Journal:  Sci Rep       Date:  2020-07-02       Impact factor: 4.379

2.  Forgotten Actors: Glycoside Hydrolases During Elongation Growth of Maize Primary Root.

Authors:  Alsu Nazipova; Oleg Gorshkov; Elena Eneyskaya; Natalia Petrova; Anna Kulminskaya; Tatyana Gorshkova; Liudmila Kozlova
Journal:  Front Plant Sci       Date:  2022-02-10       Impact factor: 5.753

3.  An Atomic Force Microscopy Study on the Effect of β-Galactosidase, α-L-Rhamnosidase and α-L-Arabinofuranosidase on the Structure of Pectin Extracted from Apple Fruit Using Sodium Carbonate.

Authors:  Piotr Mariusz Pieczywek; Justyna Cybulska; Artur Zdunek
Journal:  Int J Mol Sci       Date:  2020-06-05       Impact factor: 5.923

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.