Literature DB >> 25605384

Live-cell imaging of mammalian RNAs with Spinach2.

Rita L Strack1, Samie R Jaffrey2.   

Abstract

The ability to monitor RNAs of interest in living cells is crucial to understanding the function, dynamics, and regulation of this important class of molecules. In recent years, numerous strategies have been developed with the goal of imaging individual RNAs of interest in living cells, each with their own advantages and limitations. This chapter provides an overview of current methods of live-cell RNA imaging, including a detailed discussion of genetically encoded strategies for labeling RNAs in mammalian cells. This chapter then focuses on the development and use of "RNA mimics of GFP" or Spinach technology for tagging mammalian RNAs and includes a detailed protocol for imaging 5S and CGG60 RNA with the recently described Spinach2 tag.
© 2015 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Aptamer; Fluorescence microscopy; Live-cell imaging; RNA imaging; Spinach; Trinucleotide-repeat RNA

Mesh:

Substances:

Year:  2015        PMID: 25605384      PMCID: PMC4382203          DOI: 10.1016/bs.mie.2014.10.044

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  28 in total

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8.  Intention tremor, parkinsonism, and generalized brain atrophy in male carriers of fragile X.

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  11 in total

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Review 2.  Nucleic-Acid Structures as Intracellular Probes for Live Cells.

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Review 5.  Illuminating Messengers: An Update and Outlook on RNA Visualization in Bacteria.

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7.  Development of encoded Broccoli RNA aptamers for live cell imaging of alphavirus genomic and subgenomic RNAs.

Authors:  Voraphoj Nilaratanakul; Debra A Hauer; Diane E Griffin
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8.  Engineering a ribozyme cleavage-induced split fluorescent aptamer complementation assay.

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9.  Nanomechanics and co-transcriptional folding of Spinach and Mango.

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