| Literature DB >> 25590623 |
Renske Altena1, Rudolf S N Fehrmann2, Hink Boer1, Elisabeth G E de Vries1, Coby Meijer1, Jourik A Gietema1.
Abstract
INTRODUCTION: Chemotherapy-related endothelial damage contributes to the early development of cardiovascular morbidity in testicular cancer patients. We aimed to identify relevant mechanisms of and search for candidate biomarkers for this endothelial damage.Entities:
Mesh:
Substances:
Year: 2015 PMID: 25590623 PMCID: PMC4295859 DOI: 10.1371/journal.pone.0115372
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Top 50 genes with largest difference in expression in the different exposition settings in HMEC-1.
|
|
|
|
| ||||
|---|---|---|---|---|---|---|---|
|
|
|
|
|
|
|
|
|
| ATF3 | ↑ 9.574 | CYP1B1 | ↑ <0.0001 | CORT | ↑ 9.577 | MX1 | ↓ <0.0001 |
| KIAA1370 | ↑ 9.574 | KLF12 | ↑ <0.0001 | TREM2 | ↑ 9.222 | GPR87 | ↓ <0.0001 |
| RRAD | ↑ 9.552 | PRSS35 | ↑ <0.001 | ATF3 | ↑ 9.039 | IFI27 | ↓ <0.0001 |
| C12orf5 | ↑ 9.476 | GLS2 | ↓ <0.001 | AVPI1 | ↑ 8.757 | JMJD4 | ↑ <0.001 |
| GDF-15 | ↑ 9.454 | ENPP4 | ↑ <0.001 | AK1 | ↑ 8.658 | FAM155A | ↓ <0.001 |
| GPR87 | ↑ 9.454 | ZMAT1 | ↑ <0.001 | VASN | ↑ 8.653 | OAS3 | ↓ <0.001 |
| MDM2 | ↑ 9.356 | TMEM184C | ↑ <0.001 | SESN2 | ↑ 8.633 | MX2 | ↓ <0.001 |
| SESN2 | ↑ 9.258 | ADAM12 | ↑ <0.001 | LRDD | ↑ 8.633 | HLA-F | ↓ <0.001 |
| COL7A1 | ↑ 9.16 | RAB11FIP1 | ↑ <0.001 | AREG | ↑ 8.633 | AREG | ↓ <0.001 |
| ATG16L2 | ↑ 9.16 | PTGER2 | ↑ <0.001 | PLCD1 | ↑ 8.586 | LOC158376 | ↑ <0.001 |
| AK1 | ↑ 9.16 | SERPINB2 | ↑ <0.001 | ADM | ↑ 8.549 | ALKBH8 | ↑ <0.001 |
| FAS | ↑ 8.964 | SCFD2 | ↑ <0.01 | LRRTM2 | ↑ 8.524 | ABCC4 | ↑ <0.001 |
| LIF | ↑ 8.964 | KRTAP4-8 | ↑ <0.01 | DEDD2 | ↑ 8.457 | HIST2H2BE | ↓ <0.001 |
| VWCE | ↑ 8.866 | C10orf136 | ↑ <0.01 | RALGDS | ↑ 8.37 | RFT1 | ↑ <0.001 |
| TP53INP1 | ↑ 8.817 | HES1 | ↓ <0.01 | DNAJB2 | ↑ 8.364 | LRRC38 | ↑ <0.001 |
| VDR | ↑ 8.811 | COL1A2 | ↑ <0.01 | MSX1 | ↑ 8.328 | SNAI1 | ↓ <0.001 |
| C4orf18 | ↑ 8.768 | HIST1H2BJ | ↑ <0.01 | MST150 | ↑ 8.322 | C19orf42 | ↑ <0.01 |
| FERMT1 | ↑ 8.734 | RBPJL | ↑ <0.01 | NR4A3 | ↑ 8.157 | LOC151171 | ↓ <0.01 |
| FUCA1 | ↑ 8.691 | CRTAC1 | ↓ <0.01 | FDXR | ↑ 8.143 | SIAE | ↓ <0.01 |
| MCC | ↑ 8.691 | CCDC148 | ↓ <0.01 | ITPKA | ↑ 8.143 | IQGAP2 | ↓ <0.01 |
| NELF | ↑ 8.691 | ROR1 | ↑ <0.01 | KREMEN2 | ↑ 8.143 | POLA1 | ↑ <0.01 |
| BTG2 | ↑ 8.691 | EDN1 | ↓ <0.01 | SLC31A2 | ↑ 8.126 | PDK4 | ↓ <0.01 |
| TGFBR1 | ↑ 8.691 | TGFB2 | ↑ <0.01 | CEACAM1 | ↑ 8.107 | ATF3 | ↓ <0.01 |
| TMEM131 | ↑ 8.572 | PRKCZ | ↑ <0.01 | IRF5 | ↑ 8.101 | TNFSF10 | ↓ <0.01 |
| CDH10 | ↑ 8.572 | MARVELD2 | ↑ <0.01 | FOXL2 | ↑ 8.101 | DHX37 | ↑ <0.01 |
| FZD2 | ↓ -7.775 | ATF3 | ↓ <0.01 | VCAM1 | ↓ -8.432 | TOMM40L | ↑ <0.01 |
| C3orf36 | ↓ -7.809 | CD82 | ↓ <0.01 | C7orf10 | ↓ -8.437 | IFIT3 | ↓ <0.01 |
| TRIB2 | ↓ -7.817 | XTP3TPA | ↑ <0.01 | C3orf26 | ↓ -8.438 | IFI44L | ↓ <0.01 |
| SMA5 | ↓ -7.835 | SPTAN1 | ↓ <0.01 | MYRIP | ↓ -8.535 | TNC | ↑ <0.01 |
| NDRG4 | ↓ -7.869 | KIAA1655 | ↑ <0.01 | ROR1 | ↓ -8.56 | KREMEN2 | ↓ <0.01 |
| EBPL | ↓ -7.873 | DDB2 | ↓ <0.01 | QKI | ↓ -8.597 | HNMT | ↓ <0.01 |
| TGFB2 | ↓ -7.912 | SNAI1 | ↓ <0.01 | TRIB2 | ↓ -8.628 | BRD9 | ↑ <0.01 |
| MYCN | ↓ -7.971 | STC2 | ↑ <0.01 | CDKAL1 | ↓ -8.647 | BEX2 | ↓ <0.01 |
| SEMA3A | ↓ -7.971 | TNC | ↑ <0.01 | TFPI | ↓ -8.658 | MGC33894 | ↓ <0.01 |
| GIMAP2 | ↓ -7.992 | LRRIQ1 | ↓ <0.01 | LTBP1 | ↓ -8.664 | DUSP1 | ↓ <0.01 |
| ZFP36 | ↓ -8.001 | ASMT | ↑ <0.01 | PLK1 | ↓ -8.686 | C7orf54 | ↓ <0.01 |
| UBE2G2 | ↓ -8.044 | GATA6 | ↑ <0.01 | NAV1 | ↓ -8.714 | ID4 | ↑ <0.01 |
| RNASE1 | ↓ -8.069 | GDF-15 | ↓ <0.01 | PAPPA | ↓ -8.726 | CCDC148 | ↓ <0.01 |
| MXD3 | ↓ -8.21 | PCDHGA3 | ↓ <0.01 | PIF1 | ↓ -8.765 | MDM2 | ↓ <0.01 |
| HIST1H2AM | ↓ -8.218 | DDX19A | ↑ <0.01 | DHRSX | ↓ -8.891 | PRAP1 | ↓ <0.01 |
| C14orf94 | ↓ -8.222 | RARB | ↑ <0.01 | GMDS | ↓ -8.928 | FOS | ↓ <0.01 |
| PIF1 | ↓ -8.261 | CCND2 | ↓ <0.01 | LAMA4 | ↓ -9.02 | HES1 | ↓ <0.01 |
| OASL | ↓ -8.265 | BCS1L | ↑ <0.01 | DKFZP0335 | ↓ -9.02 | ASPA | ↓ <0.01 |
| PRSS35 | ↓ -8.44 | BIRC7 | ↑ <0.01 | CD9 | ↓ -9.051 | GDF-15 | ↓ <0.01 |
| CLEC14A | ↓ -8.482 | MX1 | ↓ <0.01 | FAT4 | ↓ -9.124 | COL9A3 | ↓ <0.01 |
| HOXD8 | ↓ -8.679 | RERG | ↑ <0.01 | DOCK1 | ↓ -9.222 | LGALS9 | ↓ <0.01 |
| HIST1H1D | ↓ -8.713 | ADAMTS12 | ↑ <0.01 | SMAD7 | ↓ -9.32 | NR4A1 | ↓ <0.01 |
| CLEC3B | ↓ -8.866 | DUSP1 | ↓ <0.01 | FHOD3 | ↓ -9.381 | ADAM12 | ↑ <0.01 |
| VCAM1 | ↓ -9.16 | AREG | ↓ <0.01 | CLEC14A | ↓ -9.418 | RNASE7 | ↓ <0.01 |
| C9orf3 | ↓ -9.552 | OSBPL1A | ↑ <0.01 | SEMA3A | ↓ -9.418 | HHATL | ↓ <0.01 |
* Overlapping genes in the “acute” exposure setting for both drugs,
† Overlapping genes in the “chronic” exposure setting for both drugs.
‡ Overlapping genes in the “acute” and “chronic” exposure setting for bleomycin.
§ Overlapping genes in the “acute” and “chronic” exposure setting for cisplatin.
Figure 1Overlapping genes in top 50 of most differentially expressed genes in HMEC-1 exposed to bleomycin and cisplatin.
Gene Set Enrichment Analysis on gene expression profiles from HMEC-1 following “acute” and “chronic” exposure to bleomycin and cisplatin, using pathway definitions from KEGG.
|
|
|
| ||||
|---|---|---|---|---|---|---|
| FDR | P-value | FDR | P-value | FDR | P-value | |
|
| ||||||
| Adherens junction | ↓ 0.07 | 0.003 | ||||
| Focal adhesion | ↓ 0.04 | <0.0001 | ||||
|
| ||||||
| p53 signalling pathway | ↑ 0.001 | <0.0001 | ↑ 0.02 | <0.0001 | ↓ 0.1 | <0.0001 |
|
| ||||||
| TGF-beta signalling pathway | ↓ 0.05 | <0.0001 | ||||
|
| ||||||
| Ubiquitin mediated proteolysis | ↓ 0.04 | 0.001 | ||||
|
| ||||||
| Endometrial cancer | ↓ 0.04 | <0.0001 | ||||
| Cholera infection | ↑ 0.10 | 0.005 | ||||
| Type I Diabetes Mellitus | ↑ 0.07 | <0.0001 | ↑ 0.05 | <0.0001 | ↓ 0.01 | <0.0001 |
| Neurodegerative disease | ↓ 0.09 | 0.008 | ||||
| Prion diseases | ↓ 0.08 | 0.01 | ||||
|
| ||||||
| Butanoate metabolism | ↑ 0.02 | <0.0001 | ||||
| Glyoxylate and dicarboxylate metabolism | ↓ 0.09 | 0.02 | ||||
| Reductive carboxylate cycle | ↓ 0.04 | 0.002 | ||||
| Glycosylphosphatidylinositol(GPI)-anchor biosynthesis | ↑ 0.03 | 0.002 | ||||
| N-Glycan biosynthesis | ↓ 0.08 | <0.0001 | ||||
| Linoleic acid metabolism | ↑ 0.08 | 0.005 | ↑ 0.09 | 0.01 | ||
| Polyunsatyrated fatty acid biosynthesis | ↓ 0.04 | 0.002 | ||||
|
| ||||||
| Antigen processing and presentation | ↓ 0.0 | <0.0001 | ||||
| Toll-like receptor signalling pathway | ↓ 0.08 | <0.0001 | ||||
No pathways were enriched according to these criteria after “chronic” exposure to bleomycin.
Figure 2Relative differences (mean ± standard deviation) in gene expression of GDF-15, ATF3, AREG in HMEC-1 after “acute” exposure to bleomycin and cisplatin measured by qRT-PCR.
Characteristics of 41 patients with disseminated testicular cancer and treated with cisplatin containing combination chemotherapy.
|
|
| |
|---|---|---|
|
| 41 | |
|
| 31 (18–46) | |
|
| ||
| Non-seminoma | 35 (85.4) | |
| Seminoma | 6 (14.6) | |
|
| ||
| Good | 33 (80.5) | |
| Intermediate | 7 (17.1) | |
| Poor | 1 (2.4) | |
|
| ||
| II | 30 (73.2) | |
| III | 4 (9.8) | |
| IV | 7 (17.1) | |
|
| ||
| 3 cycles BEP | 29 (70.7) | |
| 4 cycles BEP | 11 (26.8) | |
| 4 cycles EP | 1 (2.4) |
Abbreviations: International Germ Cell Cancer Collaborative Group (IGCCCG); bleomycin etoposide cisplatin chemotherapy (BEP).
Figure 3GDF-15.
A. Plasma GDF-15 protein levels in patients with metastatic testicular cancer (n = 41) prior to start of bleomycin- and cisplatin-based chemotherapy, compared to healthy age-matched males (n = 10); B. Plasma GDF-15 protein levels before, during and after completion of bleomcyin- and cisplatin-based chemotherapy for testicular cancer. The sample at c1d1 is drawn before initiation of chemotherapy. (*) p < 0,05 compared to baseline value or indicated time-point.
Plasma levels of GDF-15 (pg/mL), vWF (%) and hsCRP (mg/L) in testicular cancer patients (n = 41) before, during and after completion of bleomycin- and cisplatin-based chemotherapy.
|
|
|
| ||||
|---|---|---|---|---|---|---|
|
|
|
|
|
|
| |
|
| ||||||
| Day 1 (= baseline) | 383.1 | 186.8–1935.0 | 100 | 42–297 | 2.0 | 0.2–87.1 |
| Day 8 | 3473.7 | 1344.5–9028.3 | 164 | 56–319 | 0.6 | 0.2–4.9 |
| Day 15 | 1587.2 | 655.2–4014.9 | 145 | 57–394 | 4.2 | 1.1–101.0 |
|
| ||||||
| Day 1 | 1145.5 | 593.6–3074.5 | 143 | 34–360 | 5.1 | 1.1–39.8 |
| Day 8 | 4898.0 | 2183.0–10794.9 | 197 | 66–464 | 0.6 | 0.2–21.1 |
|
| ||||||
| Day 1 | 2067.7 | 639.0–4918.0 | 194 | 66–440 | 3.7 | 0.3–39.9 |
| Day 8 | 5542.8 | 702.3–18958.9 | 197 | 81–419 | 0.6 | 0.2–25.7 |
|
| ||||||
| 1009.6 | 409.7–4737.1 | 135 | 56–249 | 2.2 | 0.4–29.1 | |
|
| ||||||
| 395.2 | 246.9–913.2 | 115 | 49–218 | 1.5 | 0.2–14.3 | |
* P < 0.01 compared to baseline, Wilcoxon signed rank test
† P < 0.05 compared to baseline, Wilcoxon signed rank test
‡ P < 0.01 compared to one month after completion of chemotherapy, Wilcoxon signed rank test
§ P < 0.05 compared to one month after completion of chemotherapy, Wilcoxon signed rank test