Literature DB >> 25574025

DNA repair. PAXX, a paralog of XRCC4 and XLF, interacts with Ku to promote DNA double-strand break repair.

Takashi Ochi1, Andrew N Blackford2, Julia Coates2, Satpal Jhujh2, Shahid Mehmood3, Naoka Tamura4, Jon Travers2, Qian Wu1, Viji M Draviam4, Carol V Robinson3, Tom L Blundell1, Stephen P Jackson1,2,5.   

Abstract

XRCC4 and XLF are two structurally related proteins that function in DNA double-strand break (DSB) repair. Here, we identify human PAXX (PAralog of XRCC4 and XLF, also called C9orf142) as a new XRCC4 superfamily member and show that its crystal structure resembles that of XRCC4. PAXX interacts directly with the DSB-repair protein Ku and is recruited to DNA-damage sites in cells. Using RNA interference and CRISPR-Cas9 to generate PAXX(-/-) cells, we demonstrate that PAXX functions with XRCC4 and XLF to mediate DSB repair and cell survival in response to DSB-inducing agents. Finally, we reveal that PAXX promotes Ku-dependent DNA ligation in vitro and assembly of core nonhomologous end-joining (NHEJ) factors on damaged chromatin in cells. These findings identify PAXX as a new component of the NHEJ machinery.
Copyright © 2015, American Association for the Advancement of Science.

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Year:  2015        PMID: 25574025      PMCID: PMC4338599          DOI: 10.1126/science.1261971

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  35 in total

1.  Evolutionary trace analysis of TGF-beta and related growth factors: implications for site-directed mutagenesis.

Authors:  C A Innis; J Shi; T L Blundell
Journal:  Protein Eng       Date:  2000-12

2.  2-Step purification of the Ku DNA repair protein expressed in Escherichia coli.

Authors:  Les A Hanakahi
Journal:  Protein Expr Purif       Date:  2006-10-10       Impact factor: 1.650

3.  MDC1 directly binds phosphorylated histone H2AX to regulate cellular responses to DNA double-strand breaks.

Authors:  Manuel Stucki; Julie A Clapperton; Duaa Mohammad; Michael B Yaffe; Stephen J Smerdon; Stephen P Jackson
Journal:  Cell       Date:  2005-12-29       Impact factor: 41.582

4.  Protein structure prediction on the Web: a case study using the Phyre server.

Authors:  Lawrence A Kelley; Michael J E Sternberg
Journal:  Nat Protoc       Date:  2009       Impact factor: 13.491

5.  T7 vectors with modified T7lac promoter for expression of proteins in Escherichia coli.

Authors:  J Peränen; M Rikkonen; M Hyvönen; L Kääriäinen
Journal:  Anal Biochem       Date:  1996-05-01       Impact factor: 3.365

6.  Integration, scaling, space-group assignment and post-refinement.

Authors:  Wolfgang Kabsch
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-01-22

7.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

8.  The spatial organization of non-homologous end joining: from bridging to end joining.

Authors:  Takashi Ochi; Qian Wu; Tom L Blundell
Journal:  DNA Repair (Amst)       Date:  2014-03-11

9.  Regulation of DNA-end resection by hnRNPU-like proteins promotes DNA double-strand break signaling and repair.

Authors:  Sophie E Polo; Andrew N Blackford; J Ross Chapman; Linda Baskcomb; Serge Gravel; Andre Rusch; Anoushka Thomas; Rachel Blundred; Philippa Smith; Julia Kzhyshkowska; Thomas Dobner; A Malcolm R Taylor; Andrew S Turnell; Grant S Stewart; Roger J Grand; Stephen P Jackson
Journal:  Mol Cell       Date:  2012-02-24       Impact factor: 17.970

Review 10.  The clinical impact of deficiency in DNA non-homologous end-joining.

Authors:  Lisa Woodbine; Andrew R Gennery; Penny A Jeggo
Journal:  DNA Repair (Amst)       Date:  2014-03-11
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  136 in total

Review 1.  Pharmacological methods to transcriptionally modulate double-strand break DNA repair.

Authors:  Alanna R Kaplan; Peter M Glazer
Journal:  Int Rev Cell Mol Biol       Date:  2019-12-18       Impact factor: 6.813

Review 2.  Mutations in XRCC4 cause primordial dwarfism without causing immunodeficiency.

Authors:  Shinta Saito; Aya Kurosawa; Noritaka Adachi
Journal:  J Hum Genet       Date:  2016-05-12       Impact factor: 3.172

3.  What a 'Ku'incidence!: parallel discoveries of a new DNA repair factor.

Authors:  M Mistrik; J Bartek
Journal:  Cell Death Differ       Date:  2015-06       Impact factor: 15.828

Review 4.  DNA double-strand breaks: a potential therapeutic target for neurodegenerative diseases.

Authors:  Nidheesh Thadathil; Roderick Hori; Jianfeng Xiao; Mohammad Moshahid Khan
Journal:  Chromosome Res       Date:  2019-11-09       Impact factor: 5.239

5.  DNA-PKcs, Allostery, and DNA Double-Strand Break Repair: Defining the Structure and Setting the Stage.

Authors:  Dimitri Y Chirgadze; David B Ascher; Tom L Blundell; Bancinyane L Sibanda
Journal:  Methods Enzymol       Date:  2017-05-03       Impact factor: 1.600

6.  Phosphorylation at S2053 in Murine (S2056 in Human) DNA-PKcs Is Dispensable for Lymphocyte Development and Class Switch Recombination.

Authors:  Wenxia Jiang; Verna M Estes; Xiaobin S Wang; Zhengping Shao; Brian J Lee; Xiaohui Lin; Jennifer L Crowe; Shan Zha
Journal:  J Immunol       Date:  2019-05-17       Impact factor: 5.422

7.  PAXX and XLF DNA repair factors are functionally redundant in joining DNA breaks in a G1-arrested progenitor B-cell line.

Authors:  Vipul Kumar; Frederick W Alt; Richard L Frock
Journal:  Proc Natl Acad Sci U S A       Date:  2016-09-06       Impact factor: 11.205

8.  ZATT (ZNF451)-mediated resolution of topoisomerase 2 DNA-protein cross-links.

Authors:  Matthew J Schellenberg; Jenna Ariel Lieberman; Andrés Herrero-Ruiz; Logan R Butler; Jason G Williams; Ana M Muñoz-Cabello; Geoffrey A Mueller; Robert E London; Felipe Cortés-Ledesma; R Scott Williams
Journal:  Science       Date:  2017-09-14       Impact factor: 47.728

Review 9.  XLF/Cernunnos: An important but puzzling participant in the nonhomologous end joining DNA repair pathway.

Authors:  Vijay Menon; Lawrence F Povirk
Journal:  DNA Repair (Amst)       Date:  2017-08-18

Review 10.  Non-homologous DNA end joining and alternative pathways to double-strand break repair.

Authors:  Howard H Y Chang; Nicholas R Pannunzio; Noritaka Adachi; Michael R Lieber
Journal:  Nat Rev Mol Cell Biol       Date:  2017-05-17       Impact factor: 94.444

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