Literature DB >> 25570257

Identification of patterns of gray matter abnormalities in schizophrenia using source-based morphometry and bagging.

Eduardo Castro, Cota Navin Gupta, Manel Martínez-Ramón, Vince D Calhoun, Mohammad R Arbabshirani, Jessica Turner.   

Abstract

Despite its reliable diagnosis, schizophrenia lacks an objective diagnostic test or a validated biomarker, which prevents a better understanding of this disorder. Structural magnetic resonance imaging (sMRI) has been vastly explored to find consistent abnormality patterns of gray matter concentration (GMC) in schizophrenia, yet we are far from having reached conclusive evidence. This paper presents a machine learning approach based on resampling techniques to find brain regions with consistent patterns of GMC differences between healthy controls and schizophrenia patients, these regions being detected by means of source-based morphometry. This work uses multi-site data from the Mind Clinical Imaging Consortium, which is composed of sMRI data from 124 controls and 110 patients. Our method achieves a better classification rate than other algorithms and detects regions with GMC differences between both groups that are consistent with several findings on the literature. In addition, the results obtained on data from multiple sites suggest that it may be possible to replicate these results on other datasets.

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Year:  2014        PMID: 25570257      PMCID: PMC4349445          DOI: 10.1109/EMBC.2014.6943889

Source DB:  PubMed          Journal:  Annu Int Conf IEEE Eng Med Biol Soc        ISSN: 2375-7477


  9 in total

Review 1.  Voxel-based morphometry--the methods.

Authors:  J Ashburner; K J Friston
Journal:  Neuroimage       Date:  2000-06       Impact factor: 6.556

Review 2.  Neurobiology of schizophrenia.

Authors:  Christopher A Ross; Russell L Margolis; Sarah A J Reading; Mikhail Pletnikov; Joseph T Coyle
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Review 3.  Increased dopamine transmission in schizophrenia: relationship to illness phases.

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4.  An information-maximization approach to blind separation and blind deconvolution.

Authors:  A J Bell; T J Sejnowski
Journal:  Neural Comput       Date:  1995-11       Impact factor: 2.026

5.  Meta-analysis of gray matter anomalies in schizophrenia: application of anatomic likelihood estimation and network analysis.

Authors:  David C Glahn; Angela R Laird; Ian Ellison-Wright; Sarah M Thelen; Jennifer L Robinson; Jack L Lancaster; Edward Bullmore; Peter T Fox
Journal:  Biol Psychiatry       Date:  2008-05-16       Impact factor: 13.382

6.  Source-based morphometry: the use of independent component analysis to identify gray matter differences with application to schizophrenia.

Authors:  Lai Xu; Karyn M Groth; Godfrey Pearlson; David J Schretlen; Vince D Calhoun
Journal:  Hum Brain Mapp       Date:  2009-03       Impact factor: 5.038

7.  Patterns of Gray Matter Abnormalities in Schizophrenia Based on an International Mega-analysis.

Authors:  Cota Navin Gupta; Vince D Calhoun; Srinivas Rachakonda; Jiayu Chen; Veena Patel; Jingyu Liu; Judith Segall; Barbara Franke; Marcel P Zwiers; Alejandro Arias-Vasquez; Jan Buitelaar; Simon E Fisher; Guillen Fernandez; Theo G M van Erp; Steven Potkin; Judith Ford; Daniel Mathalon; Sarah McEwen; Hyo Jong Lee; Bryon A Mueller; Douglas N Greve; Ole Andreassen; Ingrid Agartz; Randy L Gollub; Scott R Sponheim; Stefan Ehrlich; Lei Wang; Godfrey Pearlson; David C Glahn; Emma Sprooten; Andrew R Mayer; Julia Stephen; Rex E Jung; Jose Canive; Juan Bustillo; Jessica A Turner
Journal:  Schizophr Bull       Date:  2014-12-28       Impact factor: 9.306

8.  Heritability of multivariate gray matter measures in schizophrenia.

Authors:  Jessica A Turner; Vince D Calhoun; Andrew Michael; Theo G M van Erp; Stefan Ehrlich; Judith M Segall; Randy L Gollub; John Csernansky; Steven G Potkin; Beng-Choon Ho; Juan Bustillo; S Charles Schulz; Lei Wang
Journal:  Twin Res Hum Genet       Date:  2012-06       Impact factor: 1.587

9.  Discovering brain regions relevant to obsessive-compulsive disorder identification through bagging and transduction.

Authors:  Emilio Parrado-Hernández; Vanessa Gómez-Verdejo; Manel Martínez-Ramón; John Shawe-Taylor; Pino Alonso; Jesús Pujol; José M Menchón; Narcis Cardoner; Carles Soriano-Mas
Journal:  Med Image Anal       Date:  2014-02-03       Impact factor: 8.545

  9 in total
  7 in total

Review 1.  Machine learning studies on major brain diseases: 5-year trends of 2014-2018.

Authors:  Koji Sakai; Kei Yamada
Journal:  Jpn J Radiol       Date:  2018-11-29       Impact factor: 2.374

Review 2.  Structural covariance networks in schizophrenia: A systematic review Part I.

Authors:  Konasale Prasad; Jonathan Rubin; Anirban Mitra; Madison Lewis; Nicholas Theis; Brendan Muldoon; Satish Iyengar; Joshua Cape
Journal:  Schizophr Res       Date:  2021-12-11       Impact factor: 4.939

3.  Pattern recognition of magnetic resonance imaging-based gray matter volume measurements classifies bipolar disorder and major depressive disorder.

Authors:  Harry Rubin-Falcone; Francesca Zanderigo; Binod Thapa-Chhetry; Martin Lan; Jeffrey M Miller; M Elizabeth Sublette; Maria A Oquendo; David J Hellerstein; Patrick J McGrath; Johnathan W Stewart; J John Mann
Journal:  J Affect Disord       Date:  2017-11-13       Impact factor: 4.839

4.  SchizConnect: Mediating neuroimaging databases on schizophrenia and related disorders for large-scale integration.

Authors:  Lei Wang; Kathryn I Alpert; Vince D Calhoun; Derin J Cobia; David B Keator; Margaret D King; Alexandr Kogan; Drew Landis; Marcelo Tallis; Matthew D Turner; Steven G Potkin; Jessica A Turner; Jose Luis Ambite
Journal:  Neuroimage       Date:  2015-06-30       Impact factor: 6.556

5.  Patterns of Co-Occurring Gray Matter Concentration Loss across the Huntington Disease Prodrome.

Authors:  Jennifer Ashley Ciarochi; Vince D Calhoun; Spencer Lourens; Jeffrey D Long; Hans J Johnson; H Jeremy Bockholt; Jingyu Liu; Sergey M Plis; Jane S Paulsen; Jessica A Turner
Journal:  Front Neurol       Date:  2016-09-21       Impact factor: 4.003

6.  Schizophrenia Shows Disrupted Links between Brain Volume and Dynamic Functional Connectivity.

Authors:  Anees Abrol; Barnaly Rashid; Srinivas Rachakonda; Eswar Damaraju; Vince D Calhoun
Journal:  Front Neurosci       Date:  2017-11-07       Impact factor: 4.677

7.  Recognition of Schizophrenia with Regularized Support Vector Machine and Sequential Region of Interest Selection using Structural Magnetic Resonance Imaging.

Authors:  Rowena Chin; Alex Xiaobin You; Fanwen Meng; Juan Zhou; Kang Sim
Journal:  Sci Rep       Date:  2018-09-14       Impact factor: 4.379

  7 in total

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