Literature DB >> 25560473

Modulation of alternative splicing with chemical compounds in new therapeutics for human diseases.

Kenji Ohe1, Masatoshi Hagiwara1.   

Abstract

Alternative splicing is a critical step where a limited number of human genes generate a complex and diverse proteome. Various diseases, including inherited diseases with abnormalities in the "genome code," have been found to result in an aberrant mis-spliced "transcript code" with correlation to the resulting phenotype. Chemical compound-based and nucleic acid-based strategies are trying to target this mis-spliced "transcript code". We will briefly mention about how to obtain splicing-modifying-compounds by high-throughput screening and overview of what is known about compounds that modify splicing pathways. The main focus will be on RNA-binding protein kinase inhibitors. In the main text, we will refer to diseases where splicing-modifying-compounds have been intensively investigated, with comparison to nucleic acid-based strategies. The information on their involvement in mis-splicing as well as nonsplicing events will be helpful in finding better compounds with less off-target effects for future implications in mis-splicing therapy.

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Year:  2015        PMID: 25560473     DOI: 10.1021/cb500697f

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN: 1554-8929            Impact factor:   5.100


  16 in total

Review 1.  Alternative splicing and cancer metastasis: prognostic and therapeutic applications.

Authors:  Diego M Marzese; Ayla O Manughian-Peter; Javier I J Orozco; Dave S B Hoon
Journal:  Clin Exp Metastasis       Date:  2018-05-29       Impact factor: 5.150

Review 2.  The role of RNA alternative splicing in regulating cancer metabolism.

Authors:  Itamar Kozlovski; Zahava Siegfried; Adi Amar-Schwartz; Rotem Karni
Journal:  Hum Genet       Date:  2017-04-20       Impact factor: 4.132

3.  Rescue of recurrent deep intronic mutation underlying cell type-dependent quantitative NEMO deficiency.

Authors:  Bertrand Boisson; Yoshitaka Honda; Masahiko Ajiro; Jacinta Bustamante; Matthieu Bendavid; Andrew R Gennery; Yuri Kawasaki; Jose Ichishima; Mitsujiro Osawa; Hiroshi Nihira; Takeshi Shiba; Takayuki Tanaka; Maya Chrabieh; Benedetta Bigio; Hong Hur; Yuval Itan; Yupu Liang; Satoshi Okada; Kazushi Izawa; Ryuta Nishikomori; Osamu Ohara; Toshio Heike; Laurent Abel; Anne Puel; Megumu K Saito; Jean-Laurent Casanova; Masatoshi Hagiwara; Takahiro Yasumi
Journal:  J Clin Invest       Date:  2018-12-18       Impact factor: 14.808

Review 4.  More than a messenger: Alternative splicing as a therapeutic target.

Authors:  A J Black; J R Gamarra; J Giudice
Journal:  Biochim Biophys Acta Gene Regul Mech       Date:  2019-07-02       Impact factor: 4.490

Review 5.  p53 Isoforms as Cancer Biomarkers and Therapeutic Targets.

Authors:  Liuqun Zhao; Suparna Sanyal
Journal:  Cancers (Basel)       Date:  2022-06-27       Impact factor: 6.575

Review 6.  Splicing-factor alterations in cancers.

Authors:  Olga Anczuków; Adrian R Krainer
Journal:  RNA       Date:  2016-09       Impact factor: 4.942

Review 7.  Can the HIV-1 splicing machinery be targeted for drug discovery?

Authors:  Zodwa Dlamini; Rodney Hull
Journal:  HIV AIDS (Auckl)       Date:  2017-03-10

8.  Identification of a small molecule inhibitor that stalls splicing at an early step of spliceosome activation.

Authors:  Anzhalika Sidarovich; Cindy L Will; Maria M Anokhina; Javier Ceballos; Sonja Sievers; Dmitry E Agafonov; Timur Samatov; Penghui Bao; Berthold Kastner; Henning Urlaub; Herbert Waldmann; Reinhard Lührmann
Journal:  Elife       Date:  2017-03-16       Impact factor: 8.140

Review 9.  IKBKAP/ELP1 gene mutations: mechanisms of familial dysautonomia and gene-targeting therapies.

Authors:  Berish Y Rubin; Sylvia L Anderson
Journal:  Appl Clin Genet       Date:  2017-12-15

10.  Deciphering targeting rules of splicing modulator compounds: case of TG003.

Authors:  Maki Sakuma; Kei Iida; Masatoshi Hagiwara
Journal:  BMC Mol Biol       Date:  2015-09-24       Impact factor: 2.946

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