Literature DB >> 25544878

Recombinase polymerase amplification as a promising tool in hepatitis C virus diagnosis.

Hosam Zaghloul1, Mahmoud El-Shahat1.   

Abstract

Hepatitis C virus (HCV) infection represents a significant health problem and represents a heavy load on some countries like Egypt in which about 20% of the total population are infected. Initial infection is usually asymptomatic and result in chronic hepatitis that give rise to complications including cirrhosis and hepatocellular carcinoma. The management of HCV infection should not only be focus on therapy, but also to screen carrier individuals in order to prevent transmission. In the present, molecular detection and quantification of HCV genome by real time polymerase chain reaction (PCR) represent the gold standard in HCV diagnosis and plays a crucial role in the management of therapeutic regimens. However, real time PCR is a complicated approach and of limited distribution. On the other hand, isothermal DNA amplification techniques have been developed and offer molecular diagnosis of infectious dieses at point-of-care. In this review we discuss recombinase polymerase amplification technique and illustrate its diagnostic value over both PCR and other isothermal amplification techniques.

Entities:  

Keywords:  Hepatitis C virus; Nucleic acid testing; Point-of-care; Polymerase chain reaction; Recombinase polymerase amplification

Year:  2014        PMID: 25544878      PMCID: PMC4269910          DOI: 10.4254/wjh.v6.i12.916

Source DB:  PubMed          Journal:  World J Hepatol


  50 in total

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Authors:  T Notomi; H Okayama; H Masubuchi; T Yonekawa; K Watanabe; N Amino; T Hase
Journal:  Nucleic Acids Res       Date:  2000-06-15       Impact factor: 16.971

2.  Mutation detection and single-molecule counting using isothermal rolling-circle amplification.

Authors:  P M Lizardi; X Huang; Z Zhu; P Bray-Ward; D C Thomas; D C Ward
Journal:  Nat Genet       Date:  1998-07       Impact factor: 38.330

Review 3.  The epidemiology of hepatitis C virus infection.

Authors:  Tommy Yen; Emmet B Keeffe; Aijaz Ahmed
Journal:  J Clin Gastroenterol       Date:  2003-01       Impact factor: 3.062

4.  Development of a panel of recombinase polymerase amplification assays for detection of biothreat agents.

Authors:  Milena Euler; Yongjie Wang; Doris Heidenreich; Pranav Patel; Oliver Strohmeier; Sydney Hakenberg; Matthias Niedrig; Frank T Hufert; Manfred Weidmann
Journal:  J Clin Microbiol       Date:  2013-01-23       Impact factor: 5.948

Review 5.  The hepatitis C virus: overview.

Authors:  R Purcell
Journal:  Hepatology       Date:  1997-09       Impact factor: 17.425

6.  Digital isothermal quantification of nucleic acids via simultaneous chemical initiation of recombinase polymerase amplification reactions on SlipChip.

Authors:  Feng Shen; Elena K Davydova; Wenbin Du; Jason E Kreutz; Olaf Piepenburg; Rustem F Ismagilov
Journal:  Anal Chem       Date:  2011-04-08       Impact factor: 6.986

7.  Multicenter evaluation of the VERSANT HCV RNA qualitative assay for detection of hepatitis C virus RNA.

Authors:  David A Hendricks; Michel Friesenhahn; Lorine Tanimoto; Bernd Goergen; Deborah Dodge; Lorraine Comanor
Journal:  J Clin Microbiol       Date:  2003-02       Impact factor: 5.948

8.  Helicase-dependent isothermal DNA amplification.

Authors:  Myriam Vincent; Yan Xu; Huimin Kong
Journal:  EMBO Rep       Date:  2004-07-09       Impact factor: 8.807

9.  Risk of hepatitis C seroconversion after occupational exposures in health care workers. Italian Study Group on Occupational Risk of HIV and Other Bloodborne Infections.

Authors:  V Puro; N Petrosillo; G Ippolito
Journal:  Am J Infect Control       Date:  1995-10       Impact factor: 2.918

10.  Epidemiology of hepatitis C virus (HCV) infection.

Authors:  Theodore Sy; M Mazen Jamal
Journal:  Int J Med Sci       Date:  2006-04-01       Impact factor: 3.738

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  15 in total

1.  Rapid Detection of Cyprinid Herpesvirus 3 in Latently Infected Koi by Recombinase Polymerase Amplification.

Authors:  Meagan A Prescott; Aimee N Reed; Ling Jin; Manoj K Pastey
Journal:  J Aquat Anim Health       Date:  2016-09       Impact factor: 1.625

2.  Seroprevalence of Hepatitis C, Hepatitis B, Cytomegalovirus, and Human Immunodeficiency Viruses in Multitransfused Thalassemic Children in Upper Egypt.

Authors:  Ramadan A Mahmoud; Abdel-Azeem M El-Mazary; Ashraf Khodeary
Journal:  Adv Hematol       Date:  2016-02-17

3.  Rapid detection of infectious bovine Rhinotracheitis virus using recombinase polymerase amplification assays.

Authors:  Peili Hou; Hongmei Wang; Guimin Zhao; Chengqiang He; Hongbin He
Journal:  BMC Vet Res       Date:  2017-12-13       Impact factor: 2.741

4.  Rapid and sensitive detection of canine distemper virus by real-time reverse transcription recombinase polymerase amplification.

Authors:  Jianchang Wang; Jinfeng Wang; Ruiwen Li; Libing Liu; Wanzhe Yuan
Journal:  BMC Vet Res       Date:  2017-08-15       Impact factor: 2.741

Review 5.  Advances in Diagnosis, Surveillance, and Monitoring of Zika Virus: An Update.

Authors:  Raj K Singh; Kuldeep Dhama; Kumaragurubaran Karthik; Ruchi Tiwari; Rekha Khandia; Ashok Munjal; Hafiz M N Iqbal; Yashpal S Malik; Rubén Bueno-Marí
Journal:  Front Microbiol       Date:  2018-01-19       Impact factor: 5.640

6.  Ultra-sensitive and high-throughput CRISPR-p owered COVID-19 diagnosis.

Authors:  Zhen Huang; Di Tian; Yang Liu; Zhen Lin; Christopher J Lyon; Weihua Lai; Dahlene Fusco; Arnaud Drouin; Xiaoming Yin; Tony Hu; Bo Ning
Journal:  Biosens Bioelectron       Date:  2020-05-23       Impact factor: 10.618

7.  Development of a recombinase polymerase based isothermal amplification combined with lateral flow assay (HLB-RPA-LFA) for rapid detection of "Candidatus Liberibacter asiaticus".

Authors:  Dilip Kumar Ghosh; Sunil B Kokane; Amol D Kokane; Ashish J Warghane; Manali R Motghare; Sumit Bhose; Ashwani Kumar Sharma; M Krishna Reddy
Journal:  PLoS One       Date:  2018-12-12       Impact factor: 3.240

Review 8.  Towards Multiplex Molecular Diagnosis-A Review of Microfluidic Genomics Technologies.

Authors:  Ismail Hussain Kamal Basha; Eric Tatt Wei Ho; Caffiyar Mohamed Yousuff; Nor Hisham Bin Hamid
Journal:  Micromachines (Basel)       Date:  2017-08-30       Impact factor: 2.891

9.  CRISPR-Based Isothermal Next-Generation Diagnostic Method for Virus Detection in Sugarbeet.

Authors:  Vanitharani Ramachandran; John J Weiland; Melvin D Bolton
Journal:  Front Microbiol       Date:  2021-07-08       Impact factor: 5.640

10.  Integrated sample inactivation, amplification, and Cas13-based detection of SARS-CoV-2.

Authors:  Jon Arizti-Sanz; Catherine A Freije; Alexandra C Stanton; Chloe K Boehm; Brittany A Petros; Sameed Siddiqui; Bennett M Shaw; Gordon Adams; Tinna-Solveig F Kosoko-Thoroddsen; Molly E Kemball; Robin Gross; Loni Wronka; Katie Caviness; Lisa E Hensley; Nicholas H Bergman; Bronwyn L MacInnis; Jacob E Lemieux; Pardis C Sabeti; Cameron Myhrvold
Journal:  bioRxiv       Date:  2020-05-28
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