Literature DB >> 25544786

Bayesian Multiscale Modeling of Closed Curves in Point Clouds.

Kelvin Gu1, Debdeep Pati1, David B Dunson1.   

Abstract

Modeling object boundaries based on image or point cloud data is frequently necessary in medical and scientific applications ranging from detecting tumor contours for targeted radiation therapy, to the classification of organisms based on their structural information. In low-contrast images or sparse and noisy point clouds, there is often insufficient data to recover local segments of the boundary in isolation. Thus, it becomes critical to model the entire boundary in the form of a closed curve. To achieve this, we develop a Bayesian hierarchical model that expresses highly diverse 2D objects in the form of closed curves. The model is based on a novel multiscale deformation process. By relating multiple objects through a hierarchical formulation, we can successfully recover missing boundaries by borrowing structural information from similar objects at the appropriate scale. Furthermore, the model's latent parameters help interpret the population, indicating dimensions of significant structural variability and also specifying a 'central curve' that summarizes the collection. Theoretical properties of our prior are studied in specific cases and efficient Markov chain Monte Carlo methods are developed, evaluated through simulation examples and applied to panorex teeth images for modeling teeth contours and also to a brain tumor contour detection problem.

Entities:  

Keywords:  Biomedical imaging; closed curves; cyclic basis; deformation; functional data; hierarchical modeling; multiscale

Year:  2014        PMID: 25544786      PMCID: PMC4275800          DOI: 10.1080/01621459.2014.934825

Source DB:  PubMed          Journal:  J Am Stat Assoc        ISSN: 0162-1459            Impact factor:   5.033


  5 in total

1.  Parameterization-invariant shape comparisons of anatomical surfaces.

Authors:  Sebastian Kurtek; Eric Klassen; Zhaohua Ding; Sandra W Jacobson; Joseph L Jacobson; Malcolm J Avison; Anuj Srivastava
Journal:  IEEE Trans Med Imaging       Date:  2010-12-13       Impact factor: 10.048

2.  Shape Analysis of Elastic Curves in Euclidean Spaces.

Authors:  Anuj Srivastava; Eric Klassen; Shantanu H Joshi; Ian H Jermyn
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2010-10-14       Impact factor: 6.226

3.  Active contours without edges.

Authors:  T F Chan; L A Vese
Journal:  IEEE Trans Image Process       Date:  2001       Impact factor: 10.856

4.  Looking for shapes in two-dimensional cluttered point clouds.

Authors:  Anuj Srivastava; Ian H Jermyn
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2009-09       Impact factor: 6.226

5.  A validation framework for brain tumor segmentation.

Authors:  Neculai Archip; Ferenc A Jolesz; Simon K Warfield
Journal:  Acad Radiol       Date:  2007-10       Impact factor: 3.173

  5 in total
  1 in total

1.  Nonparametric Bayes Models of Fiber Curves Connecting Brain Regions.

Authors:  Zhengwu Zhang; Maxime Descoteaux; David B Dunson
Journal:  J Am Stat Assoc       Date:  2019-04-30       Impact factor: 5.033

  1 in total

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