Literature DB >> 2553684

Rubredoxin from Clostridium perfringens: complete amino acid sequence and participation in nitrate reduction.

Y Seki1, S Seki, M Satoh, A Ikeda, M Ishimoto.   

Abstract

The complete primary structure of rubredoxin (Rd) isolated from Clostridium perfringens was sequenced to be: MKKFICDVCGYIYDPAVGDPDNGVEPGTEFKDIPDDWVCPLCGVDKSQFSETEE. The sequence was highly homologous to that of C. pasteurianum Rd but was different at 13 sites out of the total 54 amino acid residues (76% homology). It contained 1 Fe atom, 4 cysteine residues, and no labile sulfur, had a molecular weight of 6,056, and shared the general properties of classical anaerobic Rds. The pI was 4.4. The Rd was reduced with NADH in the presence of a specific NAD(P)H oxidoreductase preparation from the bacterium. The Km value of nitrate reductase for Rd as an electron-donor was 12 microM, a value comparable to that of the 13 microM for ferredoxin (Fd). These results taken together provide additional support for its role as the electron carrier in the nitrate reductase system [Seki, S., Ikeda, A., and Ishimoto, M. (1988) J. Biochem. 103, 583-584].

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Year:  1989        PMID: 2553684     DOI: 10.1093/oxfordjournals.jbchem.a122854

Source DB:  PubMed          Journal:  J Biochem        ISSN: 0021-924X            Impact factor:   3.387


  10 in total

1.  A hyperactive NAD(P)H:Rubredoxin oxidoreductase from the hyperthermophilic archaeon Pyrococcus furiosus.

Authors:  K Ma; M W Adams
Journal:  J Bacteriol       Date:  1999-09       Impact factor: 3.490

2.  Leucine 41 is a gate for water entry in the reduction of Clostridium pasteurianum rubredoxin.

Authors:  T Min; C E Ergenekan; M K Eidsness; T Ichiye; C Kang
Journal:  Protein Sci       Date:  2001-03       Impact factor: 6.725

3.  A gene complex coding for the membrane-bound hydrogenase of Alcaligenes eutrophus H16.

Authors:  C Kortlüke; K Horstmann; E Schwartz; M Rohde; R Binsack; B Friedrich
Journal:  J Bacteriol       Date:  1992-10       Impact factor: 3.490

4.  Combined spectroscopic and calorimetric characterisation of rubredoxin reversible thermal transition.

Authors:  Bárbara J Henriques; Lígia M Saraiva; Cláudio M Gomes
Journal:  J Biol Inorg Chem       Date:  2005-12-06       Impact factor: 3.358

5.  Cluster-Dependent Charge-Transfer Dynamics in Iron-Sulfur Proteins.

Authors:  Ziliang Mao; Shu-Hao Liou; Nimesh Khadka; Francis E Jenney; David B Goodin; Lance C Seefeldt; Michael W W Adams; Stephen P Cramer; Delmar S Larsen
Journal:  Biochemistry       Date:  2018-01-24       Impact factor: 3.162

6.  Five-gene cluster in Clostridium thermoaceticum consisting of two divergent operons encoding rubredoxin oxidoreductase- rubredoxin and rubrerythrin-type A flavoprotein- high-molecular-weight rubredoxin.

Authors:  A Das; E D Coulter; D M Kurtz; L G Ljungdahl
Journal:  J Bacteriol       Date:  2001-03       Impact factor: 3.490

7.  Protein contributions to redox potentials of homologous rubredoxins: an energy minimization study.

Authors:  P D Swartz; T Ichiye
Journal:  Biophys J       Date:  1997-11       Impact factor: 4.033

8.  Rubredoxin from Clostridium thermosaccharolyticum. Amino acid sequence, mass-spectrometric and preliminary crystallographic data.

Authors:  J Meyer; J Gagnon; L C Sieker; A Van Dorsselaer; J M Moulis
Journal:  Biochem J       Date:  1990-11-01       Impact factor: 3.857

9.  Two-iron rubredoxin of Pseudomonas oleovorans: production, stability and characterization of the individual iron-binding domains by optical, CD and NMR spectroscopies.

Authors:  A Perry; L Y Lian; N S Scrutton
Journal:  Biochem J       Date:  2001-02-15       Impact factor: 3.857

10.  X-ray crystal structures of the oxidized and reduced forms of the rubredoxin from the marine hyperthermophilic archaebacterium Pyrococcus furiosus.

Authors:  M W Day; B T Hsu; L Joshua-Tor; J B Park; Z H Zhou; M W Adams; D C Rees
Journal:  Protein Sci       Date:  1992-11       Impact factor: 6.725

  10 in total

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