Literature DB >> 25530742

Meta-analysis of global metabolomic data identifies metabolites associated with life-span extension.

Gary J Patti1, Ralf Tautenhahn2, Darcy Johannsen3, Ewa Kalisiak2, Eric Ravussin3, Jens C Brüning4, Andrew Dillin5, Gary Siuzdak2.   

Abstract

The manipulation of distinct signaling pathways and transcription factors has been shown to influence life span in a cell-non-autonomous manner in multicellular model organisms such as Caenorhabditis elegans. These data suggest that coordination of whole-organism aging involves endocrine signaling, however, the molecular identities of such signals have not yet been determined and their potential relevance in humans is unknown. Here we describe a novel metabolomic approach to identify molecules directly associated with extended life span in C. elegans that represent candidate compounds for age-related endocrine signals. To identify metabolic perturbations directly linked to longevity, we developed metabolomic software for meta-analysis that enabled intelligent comparisons of multiple different mutants. Simple pairwise comparisons of long-lived glp-1, daf-2, and isp-1 mutants to their respective controls resulted in more than 11,000 dysregulated metabolite features of statistical significance. By using meta-analysis, we were able to reduce this number to six compounds most likely to be associated with life-span extension. Mass spectrometry-based imaging studies suggested that these metabolites might be localized to C. elegans muscle. We extended the metabolomic analysis to humans by comparing quadricep muscle tissue from young and old individuals and found that two of the same compounds associated with longevity in worms were also altered in human muscle with age. These findings provide candidate compounds that may serve as age-related endocrine signals and implicate muscle as a potential tissue regulating their levels in humans.

Entities:  

Keywords:  Aging; C. elegans; Meta-analysis; Metabolism; Metabolomics; Sarcopenia

Year:  2014        PMID: 25530742      PMCID: PMC4267291          DOI: 10.1007/s11306-013-0608-8

Source DB:  PubMed          Journal:  Metabolomics        ISSN: 1573-3882            Impact factor:   4.290


  36 in total

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Review 2.  The plasticity of aging: insights from long-lived mutants.

Authors:  Cynthia Kenyon
Journal:  Cell       Date:  2005-02-25       Impact factor: 41.582

Review 3.  Endocrine signaling in Caenorhabditis elegans controls stress response and longevity.

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Journal:  J Endocrinol       Date:  2006-08       Impact factor: 4.286

4.  XCMS: processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification.

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Journal:  Anal Chem       Date:  2006-02-01       Impact factor: 6.986

5.  metaXCMS: second-order analysis of untargeted metabolomics data.

Authors:  Ralf Tautenhahn; Gary J Patti; Ewa Kalisiak; Takashi Miyamoto; Manuela Schmidt; Fang Yin Lo; Joshua McBee; Nitin S Baliga; Gary Siuzdak
Journal:  Anal Chem       Date:  2010-12-21       Impact factor: 6.986

6.  The cell-non-autonomous nature of electron transport chain-mediated longevity.

Authors:  Jenni Durieux; Suzanne Wolff; Andrew Dillin
Journal:  Cell       Date:  2011-01-07       Impact factor: 41.582

7.  Identification of novel genes involved in sarcopenia through RNAi screening in Caenorhabditis elegans.

Authors:  Luv Kashyap; Subashan Perera; Alfred L Fisher
Journal:  J Gerontol A Biol Sci Med Sci       Date:  2011-05-17       Impact factor: 6.053

8.  Mitochondrial electron transport is a key determinant of life span in Caenorhabditis elegans.

Authors:  J Feng; F Bussière; S Hekimi
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9.  Metabolic oxidation regulates embryonic stem cell differentiation.

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Journal:  Nat Chem Biol       Date:  2010-05-02       Impact factor: 15.040

10.  Longer lifespan, altered metabolism, and stress resistance in Drosophila from ablation of cells making insulin-like ligands.

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Journal:  Proc Natl Acad Sci U S A       Date:  2005-02-11       Impact factor: 11.205

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  13 in total

1.  Metabolome and proteome changes with aging in Caenorhabditis elegans.

Authors:  Neil Copes; Clare Edwards; Dale Chaput; Mariam Saifee; Iosif Barjuca; Daniel Nelson; Alyssa Paraggio; Patrick Saad; David Lipps; Stanley M Stevens; Patrick C Bradshaw
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2.  Lipidomic Analysis of Caenorhabditis elegans Embryos.

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Review 3.  After the feature presentation: technologies bridging untargeted metabolomics and biology.

Authors:  Kevin Cho; Nathaniel G Mahieu; Stephen L Johnson; Gary J Patti
Journal:  Curr Opin Biotechnol       Date:  2014-05-06       Impact factor: 9.740

Review 4.  A roadmap for the XCMS family of software solutions in metabolomics.

Authors:  Nathaniel G Mahieu; Jessica Lloyd Genenbacher; Gary J Patti
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Review 5.  Identification of bioactive metabolites using activity metabolomics.

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Review 6.  Emerging Omics Approaches in Aging Research.

Authors:  Jared S Lorusso; Oleg A Sviderskiy; Vyacheslav M Labunskyy
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7.  Metabolomic signature associated with reproduction-regulated aging in Caenorhabditis elegans.

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8.  Interactive XCMS Online: simplifying advanced metabolomic data processing and subsequent statistical analyses.

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9.  Metabolic drift in the aging brain.

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Journal:  Aging (Albany NY)       Date:  2016-05       Impact factor: 5.682

Review 10.  The Role of Dafachronic Acid Signaling in Development and Longevity in Caenorhabditis elegans: Digging Deeper Using Cutting-Edge Analytical Chemistry.

Authors:  Hugo Aguilaniu; Paola Fabrizio; Michael Witting
Journal:  Front Endocrinol (Lausanne)       Date:  2016-02-11       Impact factor: 5.555

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