Literature DB >> 25527423

Differential Expression of Long Noncoding RNAs in Human Cumulus Cells Related to Embryo Developmental Potential: A Microarray Analysis.

Xiao-Feng Xu1, Juan Li1, Yun-Xia Cao2, Da-Wei Chen1, Zhi-Guo Zhang1, Xiao-Jin He1, Dong-Mei Ji1, Bei-Li Chen1.   

Abstract

Long noncoding RNAs (lncRNAs), which are prevalently transcribed in the genome, are involved in a variety of biological functions, yet little is known about their abundance in human cumulus cells (CCs) during oocyte development. Here, we describe the expression profile of lncRNAs in 3 pairs of cumulus cells from mature oocytes that result in high-quality embryo (H-CCs) and from oocytes that result in poor-quality embryo (P-CCs) using microarray analysis. In this study, a total of 20 563 lncRNAs were expressed in human CCs. One hundred and twenty four lncRNAs were consistently upregulated, and 509 lncRNAs were consistently downregulated in all samples analyzed (fold change ≥ 2.0, P < .05). Quantitative real-time polymerase chain reaction (qRT-PCR) was used to validate 5 upregulated and 7 downregulated lncRNAs. The qRT-PCR results in the study were confirmed to be consistent with the microarray results. Network analysis was used for further research. The results displayed the differentially expressed lncRNAs in P-CCs between H-CCs, which suggested that lncRNAs may contribute to the processes of oocyte and early embryo development.
© The Author(s) 2014.

Entities:  

Keywords:  cumulus cells; embryo quality; long noncoding RNA; microarray

Mesh:

Substances:

Year:  2014        PMID: 25527423      PMCID: PMC4502809          DOI: 10.1177/1933719114561562

Source DB:  PubMed          Journal:  Reprod Sci        ISSN: 1933-7191            Impact factor:   3.060


  26 in total

Review 1.  Molecular mechanisms of ovulation: co-ordination through the cumulus complex.

Authors:  Darryl L Russell; Rebecca L Robker
Journal:  Hum Reprod Update       Date:  2007-01-22       Impact factor: 15.610

Review 2.  Molecular mechanisms of long noncoding RNAs.

Authors:  Kevin C Wang; Howard Y Chang
Journal:  Mol Cell       Date:  2011-09-16       Impact factor: 17.970

Review 3.  The role of microRNAs in mammalian oocytes and embryos.

Authors:  M M Hossain; D Salilew-Wondim; K Schellander; D Tesfaye
Journal:  Anim Reprod Sci       Date:  2012-08-11       Impact factor: 2.145

4.  Long non-coding RNA MALAT-1 overexpression predicts tumor recurrence of hepatocellular carcinoma after liver transplantation.

Authors:  Ming-chun Lai; Zhe Yang; Lin Zhou; Qian-qian Zhu; Hai-yang Xie; Feng Zhang; Li-ming Wu; Lei-ming Chen; Shu-sen Zheng
Journal:  Med Oncol       Date:  2011-06-16       Impact factor: 3.064

5.  New evidence of lncRNA role in tumor progression and metastasis.

Authors:  Jae Hong Im; Ruth J Muschel
Journal:  Hepatobiliary Surg Nutr       Date:  2012-12       Impact factor: 7.293

6.  Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals.

Authors:  Mitchell Guttman; Ido Amit; Manuel Garber; Courtney French; Michael F Lin; David Feldser; Maite Huarte; Or Zuk; Bryce W Carey; John P Cassady; Moran N Cabili; Rudolf Jaenisch; Tarjei S Mikkelsen; Tyler Jacks; Nir Hacohen; Bradley E Bernstein; Manolis Kellis; Aviv Regev; John L Rinn; Eric S Lander
Journal:  Nature       Date:  2009-02-01       Impact factor: 49.962

7.  Human cumulus granulosa cell gene expression: a predictor of fertilization and embryo selection in women undergoing IVF.

Authors:  L J McKenzie; S A Pangas; S A Carson; E Kovanci; P Cisneros; J E Buster; P Amato; M M Matzuk
Journal:  Hum Reprod       Date:  2004-10-07       Impact factor: 6.918

8.  Maturation-related variations in prostaglandin and fatty acid content of ovary in the kuruma prawn (Marsupenaeus japonicus).

Authors:  Daisuke Tahara; Isao Yano
Journal:  Comp Biochem Physiol A Mol Integr Physiol       Date:  2004-04       Impact factor: 2.320

Review 9.  Mouse oocyte control of granulosa cell development and function: paracrine regulation of cumulus cell metabolism.

Authors:  You-Qiang Su; Koji Sugiura; John J Eppig
Journal:  Semin Reprod Med       Date:  2009-02-05       Impact factor: 1.303

10.  Upregulated mRNA expression of desaturase and elongase, two enzymes involved in highly unsaturated fatty acids biosynthesis pathways during follicle maturation in zebrafish.

Authors:  Sairatul D Ishak; Sze-Huey Tan; Hou-Keat Khong; Annette Jaya-Ram; Yee-Ling Enyu; Meng-Kiat Kuah; Alexander Chong Shu-Chien
Journal:  Reprod Biol Endocrinol       Date:  2008-11-24       Impact factor: 5.211

View more
  21 in total

1.  Effects of long non-coding RNA SPRY4-IT1 on osteosarcoma cell biological behavior.

Authors:  Jin Xu; Ren Ding; Yaozeng Xu
Journal:  Am J Transl Res       Date:  2016-12-15       Impact factor: 4.060

Review 2.  Long non-coding RNA regulation of reproduction and development.

Authors:  David H Taylor; Erin Tsi-Jia Chu; Roman Spektor; Paul D Soloway
Journal:  Mol Reprod Dev       Date:  2015-10-30       Impact factor: 2.609

Review 3.  Regulatory role of long non-coding RNAs during reproductive disease.

Authors:  Kangsheng Liu; Xiaodong Mao; Yajun Chen; Taiping Li; Hua Ton
Journal:  Am J Transl Res       Date:  2018-01-15       Impact factor: 4.060

4.  Long non-coding RNAs in ovarian cancer: expression profile and functional spectrum.

Authors:  Selin Oncul; Paola Amero; Cristian Rodriguez-Aguayo; George A Calin; Anil K Sood; Gabriel Lopez-Berestein
Journal:  RNA Biol       Date:  2019-12-17       Impact factor: 4.652

Review 5.  'Lnc'-ing Wnt in female reproductive cancers: therapeutic potential of long non-coding RNAs in Wnt signalling.

Authors:  Mei S Ong; Wanpei Cai; Yi Yuan; Hin C Leong; Tuan Z Tan; Asad Mohammad; Ming L You; Frank Arfuso; Boon C Goh; Sudha Warrier; Gautam Sethi; Nicholas S Tolwinski; Peter E Lobie; Celestial T Yap; Shing C Hooi; Ruby Y Huang; Alan P Kumar
Journal:  Br J Pharmacol       Date:  2017-08-23       Impact factor: 8.739

Review 6.  Multiomics Analysis-Based Biomarkers in Diagnosis of Polycystic Ovary Syndrome.

Authors:  Shikha Rani; Piyush Chandna
Journal:  Reprod Sci       Date:  2022-01-27       Impact factor: 3.060

7.  Down-regulation of long non-coding RNAs in reproductive aging and analysis of the lncRNA-miRNA-mRNA networks in human cumulus cells.

Authors:  Angela Caponnetto; Rosalia Battaglia; Carmen Ferrara; Maria Elena Vento; Placido Borzì; Marianna Paradiso; Paolo Scollo; Michele Purrello; Salvatore Longobardi; Thomas D'Hooghe; Domenico Valerio; Cinzia Di Pietro
Journal:  J Assist Reprod Genet       Date:  2022-03-05       Impact factor: 3.357

8.  Long non-coding RNA HOXA-AS2 promotes migration and invasion by acting as a ceRNA of miR-520c-3p in osteosarcoma cells.

Authors:  Yihan Wang; Rui Zhang; Guangqi Cheng; Ruida Xu; Xiaofeng Han
Journal:  Cell Cycle       Date:  2018-08-06       Impact factor: 4.534

9.  Transcriptomic Analysis and Meta-Analysis of Human Granulosa and Cumulus Cells.

Authors:  Tanja Burnik Papler; Eda Vrtacnik Bokal; Ales Maver; Andreja Natasa Kopitar; Luca Lovrečić
Journal:  PLoS One       Date:  2015-08-27       Impact factor: 3.240

Review 10.  Advances of Long Noncoding RNAs-mediated Regulation in Reproduction.

Authors:  Kang-Sheng Liu; Tai-Ping Li; Hua Ton; Xiao-Dong Mao; Ya-Jun Chen
Journal:  Chin Med J (Engl)       Date:  2018-01-20       Impact factor: 2.628

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.