Literature DB >> 25525290

UV resonance Raman study of TrpZip2 and related peptides: π-π interactions of tryptophan.

Diana E Schlamadinger1, Brian S Leigh1, Judy E Kim1.   

Abstract

Aromatic interactions are important stabilizing forces in proteins but are difficult to detect in the absence of high-resolution structures. Ultraviolet resonance Raman spectroscopy is used to probe the vibrational signatures of aromatic interactions in TrpZip2, a synthetic β-hairpin peptide that is stabilized by edge-to-face and face-to-face tryptophan π-π interactions. The vibrational markers of isolated edge-to-face π-π interactions are investigated in the related β-hairpin peptide W2W11. The bands that comprise the Fermi doublet exhibit systematic shifts in position and intensity for TrpZip2 and W2W11 relative to the model peptide, W2W9, which does not form aromatic interactions. Additionally, hypochromism of the Bb absorption band of tryptophan in TrpZip2 leads to a decrease in the relative Raman cross-sections of Bb-coupled Raman bands. These results reveal spectral markers for stabilizing tryptophan π-π interactions and indicate that ultraviolet resonance Raman may be an important tool for the characterization of these biological forces.

Entities:  

Keywords:  Fermi doublet; exciton; fluorescence; noncovalent interactions; β-hairpin

Year:  2012        PMID: 25525290      PMCID: PMC4267580          DOI: 10.1002/jrs.4061

Source DB:  PubMed          Journal:  J Raman Spectrosc        ISSN: 0377-0486            Impact factor:   3.133


  22 in total

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Authors:  John F Gaff; Stefan Franzen
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Authors:  Senghane D Dieng; Johannes P M Schelvis
Journal:  J Phys Chem A       Date:  2010-10-14       Impact factor: 2.781

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Authors:  E S Meadows; S L De Wall; L J Barbour; G W Gokel
Journal:  J Am Chem Soc       Date:  2001-04-04       Impact factor: 15.419

9.  Role of tryptophan-tryptophan interactions in Trpzip beta-hairpin formation, structure, and stability.

Authors:  Ling Wu; Dan McElheny; Rong Huang; Timothy A Keiderling
Journal:  Biochemistry       Date:  2009-11-03       Impact factor: 3.162

10.  Raman structural markers of tryptophan and histidine side chains in proteins.

Authors:  Hideo Takeuchi
Journal:  Biopolymers       Date:  2003       Impact factor: 2.505

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  2 in total

1.  Insights into Protein Structure and Dynamics by Ultraviolet and Visible Resonance Raman Spectroscopy.

Authors:  Ignacio López-Peña; Brian S Leigh; Diana E Schlamadinger; Judy E Kim
Journal:  Biochemistry       Date:  2015-07-29       Impact factor: 3.162

2.  Correct folding of an α-helix and a β-hairpin using a polarized 2D torsional potential.

Authors:  Ya Gao; Yongxiu Li; Lirong Mou; Bingbing Lin; John Z H Zhang; Ye Mei
Journal:  Sci Rep       Date:  2015-06-03       Impact factor: 4.379

  2 in total

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