Literature DB >> 25520058

Near-instant surface-selective fluorogenic protein quantification using sulfonated triarylmethane dyes and fluorogen activating proteins.

Qi Yan1, Brigitte F Schmidt, Lydia A Perkins, Matharishwan Naganbabu, Saumya Saurabh, Susan K Andreko, Marcel P Bruchez.   

Abstract

Agonist-promoted G-protein coupled receptor (GPCR) endocytosis and recycling plays an important role in many signaling events in the cell. However, the approaches that allow fast and quantitative analysis of such processes still remain limited. Here we report an improved labeling approach based on the genetic fusion of a fluorogen activating protein (FAP) to a GPCR and binding of a sulfonated analog of the malachite green (MG) fluorogen to rapidly and selectively label cell surface receptors. Fluorescence microscopy and flow cytometry demonstrate that this dye does not cross the plasma membrane, binds with high affinity to a dL5** FAP-GPCR fusion construct, activating tagged surface receptors within seconds of addition. The ability to rapidly and selectively label cell surface receptors with a fluorogenic genetically encoded tag allows quantitative imaging and analysis of highly dynamic processes like receptor endocytosis and recycling.

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Year:  2015        PMID: 25520058      PMCID: PMC4318720          DOI: 10.1039/c4ob02309a

Source DB:  PubMed          Journal:  Org Biomol Chem        ISSN: 1477-0520            Impact factor:   3.876


  26 in total

1.  In vivo protein labeling with trimethoprim conjugates: a flexible chemical tag.

Authors:  Lawrence W Miller; Yunfei Cai; Michael P Sheetz; Virginia W Cornish
Journal:  Nat Methods       Date:  2005-04       Impact factor: 28.547

2.  Detection and quantification of beta2AR internalization in living cells using FAP-based biosensor technology.

Authors:  Gregory W Fisher; Sally A Adler; Margaret H Fuhrman; Alan S Waggoner; Marcel P Bruchez; Jonathan W Jarvik
Journal:  J Biomol Screen       Date:  2010-05-20

3.  Fluorogen-activating proteins as biosensors of cell-surface proteins in living cells.

Authors:  John Holleran; Dara Brown; Margaret H Fuhrman; Sally A Adler; Gregory W Fisher; Jonathan W Jarvik
Journal:  Cytometry A       Date:  2010-08       Impact factor: 4.355

4.  Site-specific labeling of cell surface proteins with biophysical probes using biotin ligase.

Authors:  Irwin Chen; Mark Howarth; Weiying Lin; Alice Y Ting
Journal:  Nat Methods       Date:  2005-01-21       Impact factor: 28.547

5.  Fluorogen-activating single-chain antibodies for imaging cell surface proteins.

Authors:  Christopher Szent-Gyorgyi; Brigitte F Schmidt; Brigitte A Schmidt; Yehuda Creeger; Gregory W Fisher; Kelly L Zakel; Sally Adler; James A J Fitzpatrick; Carol A Woolford; Qi Yan; Kalin V Vasilev; Peter B Berget; Marcel P Bruchez; Jonathan W Jarvik; Alan Waggoner
Journal:  Nat Biotechnol       Date:  2007-12-23       Impact factor: 54.908

6.  Augmentation of superoxide dismutase and catalase activity in alveolar type II cells.

Authors:  F J Walther; A B Wade; D Warburton; H J Forman
Journal:  Am J Respir Cell Mol Biol       Date:  1991-04       Impact factor: 6.914

7.  Biotin labeling and quantitation of cell-surface proteins.

Authors:  D N Turvy; J S Blum
Journal:  Curr Protoc Immunol       Date:  2001-05

8.  Redirecting lipoic acid ligase for cell surface protein labeling with small-molecule probes.

Authors:  Marta Fernández-Suárez; Hemanta Baruah; Laura Martínez-Hernández; Kathleen T Xie; Jeremy M Baskin; Carolyn R Bertozzi; Alice Y Ting
Journal:  Nat Biotechnol       Date:  2007-12-02       Impact factor: 54.908

Review 9.  PEG as a tool to gain insight into membrane fusion.

Authors:  Barry R Lentz
Journal:  Eur Biophys J       Date:  2006-10-13       Impact factor: 2.095

10.  Fluorogenic dendrons with multiple donor chromophores as bright genetically targeted and activated probes.

Authors:  Christopher Szent-Gyorgyi; Brigitte F Schmidt; James A J Fitzpatrick; Marcel P Bruchez
Journal:  J Am Chem Soc       Date:  2010-08-18       Impact factor: 15.419

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  21 in total

1.  Fluoromodule-based reporter/probes designed for in vivo fluorescence imaging.

Authors:  Ming Zhang; Subhasish K Chakraborty; Padma Sampath; Juan J Rojas; Weizhou Hou; Saumya Saurabh; Steve H Thorne; Marcel P Bruchez; Alan S Waggoner
Journal:  J Clin Invest       Date:  2015-09-08       Impact factor: 14.808

2.  Spectral fine tuning of cyanine dyes: electron donor-acceptor substituted analogues of thiazole orange.

Authors:  Elizabeth E Rastede; Matteus Tanha; David Yaron; Simon C Watkins; Alan S Waggoner; Bruce A Armitage
Journal:  Photochem Photobiol Sci       Date:  2015-07-14       Impact factor: 3.982

3.  Visualizing GABA A Receptor Trafficking Dynamics with Fluorogenic Protein Labeling.

Authors:  Jacob P Lombardi; David A Kinzlmaier; Tija C Jacob
Journal:  Curr Protoc Neurosci       Date:  2020-06

4.  Fluorogenic Photoaffinity Labeling of Proteins in Living Cells.

Authors:  Tewoderos M Ayele; Steve D Knutson; Satheesh Ellipilli; Hyun Hwang; Jennifer M Heemstra
Journal:  Bioconjug Chem       Date:  2019-04-17       Impact factor: 4.774

5.  Super-Resolution Microscopy and Single-Protein Tracking in Live Bacteria Using a Genetically Encoded, Photostable Fluoromodule.

Authors:  Saumya Saurabh; Adam M Perez; Colin J Comerci; Lucy Shapiro; W E Moerner
Journal:  Curr Protoc Cell Biol       Date:  2017-06-19

Review 6.  Advances in chemical labeling of proteins in living cells.

Authors:  Qi Yan; Marcel P Bruchez
Journal:  Cell Tissue Res       Date:  2015-03-07       Impact factor: 5.249

7.  A versatile optical tool for studying synaptic GABAA receptor trafficking.

Authors:  Joshua M Lorenz-Guertin; Madeleine R Wilcox; Ming Zhang; Mads B Larsen; Jyotsna Pilli; Brigitte F Schmidt; Marcel P Bruchez; Jon W Johnson; Alan S Waggoner; Simon C Watkins; Tija C Jacob
Journal:  J Cell Sci       Date:  2017-10-12       Impact factor: 5.285

8.  Activity-evoked and spontaneous opening of synaptic fusion pores.

Authors:  Dinara Bulgari; David L Deitcher; Brigitte F Schmidt; M Alexandra Carpenter; Christopher Szent-Gyorgyi; Marcel P Bruchez; Edwin S Levitan
Journal:  Proc Natl Acad Sci U S A       Date:  2019-08-05       Impact factor: 11.205

9.  Select α-arrestins control cell-surface abundance of the mammalian Kir2.1 potassium channel in a yeast model.

Authors:  Natalie A Hager; Collin J Krasowski; Timothy D Mackie; Alexander R Kolb; Patrick G Needham; Andrew A Augustine; Alison Dempsey; Christopher Szent-Gyorgyi; Marcel P Bruchez; Daniel J Bain; Adam V Kwiatkowski; Allyson F O'Donnell; Jeffrey L Brodsky
Journal:  J Biol Chem       Date:  2018-05-21       Impact factor: 5.157

10.  HIV-1 Envelope Glycoprotein Trafficking through the Endosomal Recycling Compartment Is Required for Particle Incorporation.

Authors:  Junghwa Kirschman; Mingli Qi; Lingmei Ding; Jason Hammonds; Krista Dienger-Stambaugh; Jaang-Jiun Wang; Lynne A Lapierre; James R Goldenring; Paul Spearman
Journal:  J Virol       Date:  2018-02-12       Impact factor: 5.103

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