Literature DB >> 25515806

Novel and functional DNA sequence variants within the GATA5 gene promoter in ventricular septal defects.

Ji-Ping Shan1, Xiao-Li Wang, Yuan-Gang Qiao, Hong-Xin Wan Yan, Wen-Hui Huang, Shu-Chao Pang, Bo Yan.   

Abstract

BACKGROUND: Congenital heart disease (CHD) is the most common human birth defect. Genetic causes for CHD remain largely unknown. GATA transcription factor 5 (GATA 5) is an essential regulator for the heart development. Mutations in the GATA5 gene have been reported in patients with a variety of CHD. Since misregulation of gene expression have been associated with human diseases, we speculated that changed levels of cardiac transcription factors, GATA5, may mediate the development of CHD.
METHODS: In this study, GATA5 gene promoter was genetically and functionally analyzed in large cohorts of patients with ventricular septal defect (VSD) (n=343) and ethnic-matched healthy controls (n=348).
RESULTS: Two novel and heterozygous DNA sequence variants (DSVs), g.61051165A>G and g.61051463delC, were identified in three VSD patients, but not in the controls. In cultured cardiomyocytes, GATA5 gene promoter activities were significantly decreased by DSV g.61051165A>G and increased by DSV g.61051463delC. Moreover, fathers of the VSD patients carrying the same DSVs had reduced diastolic function of left ventricles. Three SNPs, g.61051279C>T (rs77067995), g.61051327A>C (rs145936691) and g.61051373G>A (rs80197101), and one novel heterozygous DSV, g.61051227C>T, were found in both VSD patients and controls with similar frequencies.
CONCLUSION: Our data suggested that the DSVs in the GATA5 gene promoter may increase the susceptibility to the development of VSD as a risk factor.

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Year:  2014        PMID: 25515806     DOI: 10.1007/s12519-014-0511-z

Source DB:  PubMed          Journal:  World J Pediatr            Impact factor:   2.764


  43 in total

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2.  Mutational spectrum of the GATA5 gene associated with familial atrial fibrillation.

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Journal:  Int J Cardiol       Date:  2012-04-06       Impact factor: 4.164

3.  Upstream stimulatory factor 1 activates GATA5 expression through an E-box motif.

Authors:  Bohao Chen; Rona Hsu; Zhenping Li; Paul C Kogut; Qingxia Du; Kelly Rouser; Blanca Camoretti-Mercado; Julian Solway
Journal:  Biochem J       Date:  2012-08-15       Impact factor: 3.857

4.  GATA factors efficiently direct cardiac fate from embryonic stem cells.

Authors:  Harma K Turbendian; Miriam Gordillo; Su-Yi Tsai; Jia Lu; Guoxin Kang; Ting-Chun Liu; Alice Tang; Susanna Liu; Glenn I Fishman; Todd Evans
Journal:  Development       Date:  2013-03-13       Impact factor: 6.868

5.  Distinct functions are implicated for the GATA-4, -5, and -6 transcription factors in the regulation of intestine epithelial cell differentiation.

Authors:  X Gao; T Sedgwick; Y B Shi; T Evans
Journal:  Mol Cell Biol       Date:  1998-05       Impact factor: 4.272

6.  Alternative promoter and GATA5 transcripts in mouse.

Authors:  Bohao Chen; Elena Yates; Yong Huang; Paul Kogut; Lan Ma; Jerrold R Turner; Yun Tao; Blanca Camoretti-Mercado; Deborah Lang; Eric C Svensson; Joe G N Garcia; Peter J Gruber; Edward E Morrisey; Julian Solway
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7.  A novel GATA5 loss-of-function mutation underlies lone atrial fibrillation.

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Journal:  Int J Mol Med       Date:  2012-11-20       Impact factor: 4.101

8.  Cooperative interaction between GATA5 and NF-ATc regulates endothelial-endocardial differentiation of cardiogenic cells.

Authors:  Georges Nemer; Mona Nemer
Journal:  Development       Date:  2002-09       Impact factor: 6.868

Review 9.  The roles of GATA-4, -5 and -6 in vertebrate heart development.

Authors:  Tessa Peterkin; Abigail Gibson; Matthew Loose; Roger Patient
Journal:  Semin Cell Dev Biol       Date:  2004-12-15       Impact factor: 7.727

10.  Control of early cardiac-specific transcription of Nkx2-5 by a GATA-dependent enhancer.

Authors:  C L Lien; C Wu; B Mercer; R Webb; J A Richardson; E N Olson
Journal:  Development       Date:  1999-01       Impact factor: 6.868

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  6 in total

1.  Compound heterozygous GATA5 mutations in a girl with hydrops fetalis, congenital heart defects and genital anomalies.

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Journal:  Hum Genet       Date:  2017-02-08       Impact factor: 4.132

Review 2.  The genetics of isolated congenital heart disease.

Authors:  Shannon N Nees; Wendy K Chung
Journal:  Am J Med Genet C Semin Med Genet       Date:  2019-12-26       Impact factor: 3.908

3.  Genetic Basis of Human Congenital Heart Disease.

Authors:  Shannon N Nees; Wendy K Chung
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4.  Genome-Wide Association Study of Down Syndrome-Associated Atrioventricular Septal Defects.

Authors:  Dhanya Ramachandran; Zhen Zeng; Adam E Locke; Jennifer G Mulle; Lora J H Bean; Tracie C Rosser; Kenneth J Dooley; Clifford L Cua; George T Capone; Roger H Reeves; Cheryl L Maslen; David J Cutler; Eleanor Feingold; Stephanie L Sherman; Michael E Zwick
Journal:  G3 (Bethesda)       Date:  2015-07-20       Impact factor: 3.154

5.  Specificity, redundancy and dosage thresholds among gata4/5/6 genes during zebrafish cardiogenesis.

Authors:  Jessica Sam; Emily J Mercer; Ingrid Torregroza; Kelly M Banks; Todd Evans
Journal:  Biol Open       Date:  2020-06-24       Impact factor: 2.422

Review 6.  Genetics of congenital heart disease: a narrative review of recent advances and clinical implications.

Authors:  Jun Yasuhara; Vidu Garg
Journal:  Transl Pediatr       Date:  2021-09
  6 in total

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