Literature DB >> 25510544

Assessment of the tautomeric population of benzimidazole derivatives in solution: a simple and versatile theoretical-experimental approach.

Carlos Diaz1, Ligia Llovera, Lorenzo Echevarria, Florencio E Hernández.   

Abstract

Herein, we present a simple and versatile theoretical-experimental approach to assess the tautomeric distribution on 5(6)-aminobenzimidazole (5(6)-ABZ) derivatives in solution via one-photon absorption. The method is based on the optimized weighted sum of the theoretical spectra of the corresponding tautomers. In this article we show how the choice of exchange-correlation functional (XCF) employed in the calculations becomes crucial for the success of the approach. After the systematic analysis of XCFs with different amounts of exact-exchange we found a better performance for B3LYP and PBE0. The direct test of the proposed method on omeprazole, a well-known 5(6)-benzimidazole based pharmacotherapeutic, demonstrate its broader applicability. The proposed approach is expected to find direct applications on the tautomeric analysis of other molecular systems exhibiting similar tautomeric equilibria.

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Year:  2014        PMID: 25510544     DOI: 10.1007/s10822-014-9810-7

Source DB:  PubMed          Journal:  J Comput Aided Mol Des        ISSN: 0920-654X            Impact factor:   3.686


  24 in total

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Review 6.  A review of omeprazole use in the treatment of acid-related disorders in children.

Authors:  A E Zimmermann; J K Walters; B G Katona; P E Souney; D Levine
Journal:  Clin Ther       Date:  2001-05       Impact factor: 3.393

7.  Structure of 5-methoxy-2-([4-methoxy-3,5-dimethyl-2-pyridinyl) methyl]sulfinyl)-1H-benzimidazole (omeprazole).

Authors:  H Ohishi; Y In; T Ishida; M Inoue; F Sato; M Okitsu; T Ohno
Journal:  Acta Crystallogr C       Date:  1989-12-15       Impact factor: 1.172

8.  Computational determination of aqueous pKa values of protonated benzimidazoles (part 1).

Authors:  Trevor N Brown; Nelaine Mora-Diez
Journal:  J Phys Chem B       Date:  2006-05-11       Impact factor: 2.991

9.  Synthesis and antimycobacterial activity of 2-substituted halogenobenzimidazoles.

Authors:  Z Kazimierczuk; M Andrzejewska; J Kaustova; V Klimesova
Journal:  Eur J Med Chem       Date:  2005-02       Impact factor: 6.514

10.  The tautomerism of Omeprazole in solution: a 1H and 13C NMR study.

Authors:  Rosa M Claramunt; Concepción López; Ibon Alkorta; José Elguero; Rong Yang; Steve Schulman
Journal:  Magn Reson Chem       Date:  2004-08       Impact factor: 2.447

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1.  Theoretical study of the geometric and electronic characterization of carbendazim-based drug (Nocodazole).

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